Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1697 ATGTGGGCGCAGCAACTGTTACCTCAAGCGACCCACAAAGCCTTGTTCATTCCATCACCTTCACCTCCAATCCCTTCAAAAACGCAATCTTTTGTGCAACTCCGCGCGACCCAGAATGGCAAAACCTCATCATCATCATCATCATGTTCATATTCATGTTCATGTAGTAGTAGGAGCATATTAACGGCAGCAATAACAGGTTTGGAAGAAGAGCTTCCACCAAACGCGGTTCGGAGGAAGAGGGACCCGCGATGGAGAGGAGGGTTCAGTCTTGGAGTTGACTTGGGAATGGCTCGCACTGGCCTTGCCCTCAGCAAAGGCTTCTCCATGCGCCCTTTAACTGTTTTGGAACTGCGAGGACAGAAGCTCGATGTTCGGATTCTTGACATTGCCGAACAAGAGGAGGCTGATGAGTTTATAATTGGACTTCCAAAATCTTTTGATGGGAAGGAAACACCACAGTCGAACATAGTTCGTAGTGTTGCAGGAAGACTTGCTATTCGAGCTGCAGAGAGGGGCTGGAGAGTGTATCTACAGGATGAACATGGAACAACAACAGAAGCAGTAGATAGAATGATCAACATGGGCCTAAGTAAGTCCTCCCAGCAGAAGAAACTTGATGCCTATGCTGCCATGATGGTACTTGAGAGATATTTCTCCACATCAGGTGAGGATGCTGAACTTGTTTTGCCAAAGAATCTTGAACTACAAGGAAAACTTAGAAGGGGTCCTCCCAGAGATGCTGATTTATTCTCGGATGAAGATTAA 768 0.4661 MWAQQLLPQATHKALFIPSPSPPIPSKTQSFVQLRATQNGKTSSSSSSCSYSCSCSSRSILTAAITGLEEELPPNAVRRKRDPRWRGGFSLGVDLGMARTGLALSKGFSMRPLTVLELRGQKLDVRILDIAEQEEADEFIIGLPKSFDGKETPQSNIVRSVAGRLAIRAAERGWRVYLQDEHGTTTEAVDRMINMGLSKSSQQKKLDAYAAMMVLERYFSTSGEDAELVLPKNLELQGKLRRGPPRDADLFSDED* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1697 255 Gene3D - 90 227 IPR037027 GO:0006139
Dod07g1697 255 Hamap Putative pre-16S rRNA nuclease [yqgF]. 88 223 IPR005227 GO:0006364
Dod07g1697 255 SMART rnase_8s 88 188 IPR006641 GO:0006139
Dod07g1697 255 CDD YqgF 91 219 IPR005227 GO:0006364
Dod07g1697 255 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 1 253 - -
Dod07g1697 255 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 1 253 IPR005227 GO:0006364
Dod07g1697 255 SUPERFAMILY Ribonuclease H-like 89 221 IPR012337 -
Dod07g1697 255 TIGRFAM RNAse_H_YqgF: putative transcription antitermination factor YqgF 91 219 IPR005227 GO:0006364
Dod07g1697 255 Pfam Holliday junction resolvase 90 220 IPR005227 GO:0006364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1697 - - lja:Lj3g3v1440180.1 343.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1697 07 44905437 44908562 Dod07g1697 07 44905437 44908562 ECH