Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1539 ATGATGGCATGCCAAAATTGGCCAGAGCCAGTGATTAGAGTCCAAGCCTTGGCTGAAAGTGGCATAGGCTCAATCCCTGAACGTTTCATCAAGCCTCAATCCCAAAGACCCTCTACCAATTTCGTTCCAAAACAAGGCTCTCGTGTTGATGAGAACATCAACATCCCGGTCATTGATCTTCAGCACCTTTATGGTGAGGACCAAAGGCTTAAGGAAGAGACACTCAAAAGGGTCTCTGAGGCTTGTAGGGAATGGGGTTTCTTTCAAGTGCTGAACCATGGTGTTAGCCATGATTTGATGAGGCGTGCTAGGGAGGTGTGGCGTGAGTTCTTTCACCAGCCACTTGAGGTGAAGGAGCAATATGCTAATTCCCCCATCACCTATGAAGGGTATGGTAGTCGCTTGGGTGTGAAAAAGGGTGCCATTTTGGATTGGAGTGACTACTTCTTTCTCCATTACATGCCTTGCTCACTTAGGGACCAAAACAAGTGGCCTGCCCTCCCAACATCTTTAAGGGATGTGATTGCTGAATATGGTGACCAAGTGGTTAAGCTAGGAGGAAGGATACTTCAGTTGATGTCAATAAATCTTGGCCTGAGAGAGGACTTCCTTATGAATGCATTTGGTGGAGAGAGTGACATTGGTGCTTGCTTAAGGGTGAATTTCTATCCAAAGTGCCCACAACCTGACCTCACTCTTGGCCTCTCCCCTCACTCAGACCCTGGTGGTATGACCATTCTACTCCCTGACGATTATGTTTCTGGACTCCAAGTACGCAGGGGTGAAGATTGGATCACTGTCAAGGCAGTCCCAAATGCTTTCATCATCAACATTGGTGACCAAATTCAGGTGCTGAGCAATGCAATATACAAGAGCATAGAACATAGGGTAATTGTGAACTCAAACAAAGATCGAGTTTCATTGGCATTCTTTTACAACCCAAGAAGCGATTTGCTGATTGAACCTGCCAAGGAGCTTGTGACTGAAGAAAGGCCAGCACTCTACCCACCAATGACATTTGATGAATACAGACTCTACATTAGGACAAAAGGACCTAGTGGAAAAGCCCAAGTTGAATCTTTGACTTCTTCCCAAACGTGA 1101 0.4596 MMACQNWPEPVIRVQALAESGIGSIPERFIKPQSQRPSTNFVPKQGSRVDENINIPVIDLQHLYGEDQRLKEETLKRVSEACREWGFFQVLNHGVSHDLMRRAREVWREFFHQPLEVKEQYANSPITYEGYGSRLGVKKGAILDWSDYFFLHYMPCSLRDQNKWPALPTSLRDVIAEYGDQVVKLGGRILQLMSINLGLREDFLMNAFGGESDIGACLRVNFYPKCPQPDLTLGLSPHSDPGGMTILLPDDYVSGLQVRRGEDWITVKAVPNAFIINIGDQIQVLSNAIYKSIEHRVIVNSNKDRVSLAFFYNPRSDLLIEPAKELVTEERPALYPPMTFDEYRLYIRTKGPSGKAQVESLTSSQT* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1539 366 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 362 - -
Dod07g1539 366 Gene3D - 9 349 IPR027443 -
Dod07g1539 366 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 213 314 IPR005123 -
Dod07g1539 366 PRINTS Isopenicillin N synthase signature 274 300 - -
Dod07g1539 366 PRINTS Isopenicillin N synthase signature 78 95 - -
Dod07g1539 366 Pfam 2OG-Fe(II) oxygenase superfamily 216 314 IPR044861 -
Dod07g1539 366 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 8 362 - -
Dod07g1539 366 SUPERFAMILY Clavaminate synthase-like 10 349 - -
Dod07g1539 366 Pfam non-haem dioxygenase in morphine synthesis N-terminal 55 166 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1539 Dod-Chr7 41802641 41806187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1539 14 361 Glycosyltransferase AT5G59530 32.394 1.22e-53 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1539 - - gmx:100809662 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1539 07 41802641 41806187 Dod07g1539 07 41802641 41806187 ECH