Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1535 ATGGTGGGAAAAGCCATGGCCGCGACCTTGCGCGAAAAGCTCGCGAGTCTCGCGAACTCCGCCAAGTTTGCCGGCGACGTTACCTCAAAGCTTGAAACGCTCAGCCGTCTGCGGCGGGAGCTTCCGCCTGAGGACCCCGTTCTCCTCACTGAGTTCCTCCCTCCCCTCTTCGAGTTCCTATCCGATCGATTCAGCCCCGTTCGCAAGTTCATCACCGAGATGGTTGGTGAAATTGGATTGAAGAACGCGGAGTTCTTGCCTGGCATTGTGCCTGTGCTGATTGAAGTGTTGGATGATGAGACGCCAGCCGTTGTTCGACAAACTATACTCTGTGGCATCGATTTGTTTCGTTCCACGCTTGAGAAAATCGCCATTCAGGGTCTATATTCTAGTGATTTGGACAGTGCACTTGAATCTGCATGGGCATGGATGATTAAATTCAAAGACAAAGTATACTCAATAGCTTTTCAACATGGAAGCAGTGGTGCAAAGCTGCTGGCACTGAAGTTTGTTGAAGCTGTTATTCGTCTGTACACACCTGATCCTAATGTTTCCTCGGAGCCCACTTCTCTTCAAGGAAGGCCTATCGGATTCAATATATCATGGCTGAGGCGGGGTCATCCTGTACTTAATGTTGGAGATTTGTCAATTGAAGCCAGTGACAGTTTGGGTCTATTGCTTGATCAACTCAGGTTTCCAACTGTGAAGTCTTTGAGTAACTCAGTGATCATTGTGCTAATTAAAAGCCTTTCAGCTATTGCAATAGACAGGCCTGCATTCTTTGGCCGCATCTTGCCAGTTTTGCTCAATTTGGAACTCTCAAGCTCTGTTGTTAATGGGGTGTGCATAACAGCTGCACATCTTGCTTTGAAGAATGCCTTTCTTACATGCTCAAAATGTACACATCCAAGTGCTGCTCCGTGGAGAGATCGTTTGGCTGGTGCCTTGAAGGAGATACAGTCTGAAGGGAAGGCGGACCAGATTTTCCACCTATTATCTGCAAGTAATGGAAGCATAGAGAAAGAGAAGGATGATCAACCAGTCATCAAGGTAGAGGAACCTACAGTAAATTCATGTGATTCAGTGCACAGTAATTCAGCAAATAAACGATCTGGATCCCAAAATGGAGGTGATTCAGCTGAAGATGAAAATGTGAGTGTAAAGCGTGTCAAAACAACAACCGCTGGTTTAAAGGAACCTAAGAAAGAGTTAGATGGAGGTACCACTAACTCTCAGGATTACACCCATTCAACTACACCAACATCTTCAAAAGGAGATGTAGAAAATGGGCATGTACAGCAGCTTGTCGCCATGTTTGGTGATTTGGTTGCTCAGGGTGAAAAGGCTGTTGCATACTTAGAAATTCTTATATCAAGTATTTCTGCTGACTTGTTAGCTGATGTGGTTATGGCAAATATGCGTTACCTACCTCCAAGTTATCCCAACAGTGAAGGAGATGATGAACAGCTGCATGACATTAGTATTGTTGGTTCTGACGATAAGGCTAAATATCCACCATCATTTGTAGCTGGGGTCATGTCGCTTTCCAGTACTTTCCCGCCAATAGCTACACTTCTTGATTCTCACCAATCCATGTCCAATGAGATAGTGAGGTCTCAAGGGGACGAAGAAATTTCTGCAACTGAAGTAGATAATGCTGTTGTGTCAAATCTTCGATCTGAAAATGTGCCATCACCTACTGACTTTCCATCCTCTGATGCCAGCATACCTGGAGTGGAGAATGGATGCGCACCTGTGCCTTCTGACATTCATGAAATTGGAAACATAGATAGTGGAATCCCCGGCCTGGATTCTTTTGGTCGTAATGATGCTTTGTCAGAAAGTTTGGCTGCTTCCTCATTGGCTTCTAGTGAGATTCAACTTGAAGCTAATCAAGAGCAAGCTATGAGTTTGGATCAAAGGTCACCCATGAACATAGTTCCATCAATATCAACGGATAGATCTGAGGAACTCAGCCCAAAAGCAGCAGCTTTTACAGATGTCAATAGCTTTGTGTCCTCAACCGCTACTTCGGTTGTGCTGCCTTCACGTGTAGTCCTTCCAAAGATGATTGCTCCCGTCGTTGACCTTGAAGATGAGCAAAAGGATCATTTGCAGAAGTTGTGTTTTACACGTATCATTGATGCATATAAGCAAATAGCTTTAGCTGGAGGCTCACAAGTCCGTTTCTCAATACTTGCTTATTTAGGAGTAGAGTTTCCCTTGGAATTAGACCCATGTAAACTACTACAGAAGCATATTTTGGTTGATTATACCAGTCATGAGGGACACGAGTTGACATTGCGTGTCCTCTACAGGTTATTTGGTGAGGCTGAAGAGGAACCTGACTTCTTTTCTTCAACAACTGCAGCTTCTGCATATGAAACATTCCTCCTAACAGTGGCGGAAGCACTTAGAGATTCTTTTCCACCTTCGGATAAATCATTAAGTAAATTGCTTGGTGAATCTCCATATTTACCAAAATCAGTTTTAAAAATTCTAGAGAACATGTGTTCTCCTGGAAACGGGAATAAAGTTGAAAAAGAGTTACACTCTCTGAATGCTGACAGAGTTACCCAAGGTCTCAGTGCTGTATGGAGTTTGATTCTTCTGAGGCCTCCCATTCGGGATAGTTGCTTAAAAATTGCTTTACAGAGTGCAGTGCATCACTTGGATGAAGTGCGTATGAAGGCAATACGTTTGGTGGCAAATAAGCTTTATCCTTTACCACACATTTCTCAGCAAATAGAAGATTTTGCAAAGGAAAAGCTGTTCTCAGTGATGAGTGATGCGTCTGGAGCTAATGATGCTGAAGGATCCGTTGCTGATTCGCAAAAGGGACCTGATAATGAAAAACTTGCAAATGAGCCATCTTCATTAAGTGGCAGCAGCAAGGATATCTCATCAGATAATCGTCAATCATTCACGTCTGAAAGCACCTCTCCAGATTCAGTTTCTGAGGCTCAGAGGTTCATGTCATTGTATTTTGCTCTGTGTACAAAGAAACACTCTCTCTTTCGCCAAATATTTGTCGTCTACAGAAGCACATCAAAAGCAGTGAAGCAGGCAGTTCTTCGCCAAATTCCTATACTAGTGCGCACTATGGGTTCATCTTCAGATCTCCTTGAAATTATTTCAGATCCTCCAAATGGAAGTGAGAACCTCTTAATGCAGGTGTTGCATACACTTACTGATGGTACAATCCCTTCTAAGGATTTGATATTTACGGTGAAGAGGTTTTATGATTCTAAACTTAAGGATGCAGAGGTTCTTATTCCAATATTACCATTCCTACCGAAAGATGAGGTAATGCCAGTTTTTCCTCACATCGTGAACCTTCCTTTGGAGAAGTTTCAGACAGCACTTGGTCGCATATTGCAGGGATCATCACAATCTGGGCCGGTGCTTACACCTGCTGAAGTTTTAATTGCTATCCATGGAATTGATCCAGAAAGAGATGGAATTCCCTTAAAAAAGGTCACAGATGCATGCAATTCTTGCTTTGAGCAGCGGCAAATTTTCACTCAAGAAGTTCTTGCCAAAGTTTTGAATCAATTGGTTGAGCAAATTCCTCTTCCTTTGTTGTTTATGCGTACAGTGTTACAAGCAATTGGTGCTTTTCCAACACTGGTGGACTTTATAATGGGGATTCTCTCTCGCCTTGTGACGAAGCAGATTTGGAAATACCCAAAGTTGTGGGTGGGGTTCTTGAAGTGTGTTCAGTTGACAAAACCTCAATCATTTAGTGTTTTGCTTCAGCTACCTCCTGCACAATTAGAAAATGCATTAAATAGAACTCCAGCACTGAAGGCACCATTGATCGCTCATGCTAGCCAGCCAGATATACAGTCTTCACTACCCAGGTCTGTGCTGGTTGTTCTGGGAATTGTTTCAGATCCTCAGGTTTCAAGTCAGGCACAAACTGGTCAAACACAGACTGGTGAGACATCCAACTCAGAAAAGGATACAGTTACTGAGAAGTCTAAAGAATCATCTACGGCTAGCTAA 4008 0.4326 MVGKAMAATLREKLASLANSAKFAGDVTSKLETLSRLRRELPPEDPVLLTEFLPPLFEFLSDRFSPVRKFITEMVGEIGLKNAEFLPGIVPVLIEVLDDETPAVVRQTILCGIDLFRSTLEKIAIQGLYSSDLDSALESAWAWMIKFKDKVYSIAFQHGSSGAKLLALKFVEAVIRLYTPDPNVSSEPTSLQGRPIGFNISWLRRGHPVLNVGDLSIEASDSLGLLLDQLRFPTVKSLSNSVIIVLIKSLSAIAIDRPAFFGRILPVLLNLELSSSVVNGVCITAAHLALKNAFLTCSKCTHPSAAPWRDRLAGALKEIQSEGKADQIFHLLSASNGSIEKEKDDQPVIKVEEPTVNSCDSVHSNSANKRSGSQNGGDSAEDENVSVKRVKTTTAGLKEPKKELDGGTTNSQDYTHSTTPTSSKGDVENGHVQQLVAMFGDLVAQGEKAVAYLEILISSISADLLADVVMANMRYLPPSYPNSEGDDEQLHDISIVGSDDKAKYPPSFVAGVMSLSSTFPPIATLLDSHQSMSNEIVRSQGDEEISATEVDNAVVSNLRSENVPSPTDFPSSDASIPGVENGCAPVPSDIHEIGNIDSGIPGLDSFGRNDALSESLAASSLASSEIQLEANQEQAMSLDQRSPMNIVPSISTDRSEELSPKAAAFTDVNSFVSSTATSVVLPSRVVLPKMIAPVVDLEDEQKDHLQKLCFTRIIDAYKQIALAGGSQVRFSILAYLGVEFPLELDPCKLLQKHILVDYTSHEGHELTLRVLYRLFGEAEEEPDFFSSTTAASAYETFLLTVAEALRDSFPPSDKSLSKLLGESPYLPKSVLKILENMCSPGNGNKVEKELHSLNADRVTQGLSAVWSLILLRPPIRDSCLKIALQSAVHHLDEVRMKAIRLVANKLYPLPHISQQIEDFAKEKLFSVMSDASGANDAEGSVADSQKGPDNEKLANEPSSLSGSSKDISSDNRQSFTSESTSPDSVSEAQRFMSLYFALCTKKHSLFRQIFVVYRSTSKAVKQAVLRQIPILVRTMGSSSDLLEIISDPPNGSENLLMQVLHTLTDGTIPSKDLIFTVKRFYDSKLKDAEVLIPILPFLPKDEVMPVFPHIVNLPLEKFQTALGRILQGSSQSGPVLTPAEVLIAIHGIDPERDGIPLKKVTDACNSCFEQRQIFTQEVLAKVLNQLVEQIPLPLLFMRTVLQAIGAFPTLVDFIMGILSRLVTKQIWKYPKLWVGFLKCVQLTKPQSFSVLLQLPPAQLENALNRTPALKAPLIAHASQPDIQSSLPRSVLVVLGIVSDPQVSSQAQTGQTQTGETSNSEKDTVTEKSKESSTAS* 1336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1535 1335 Pfam Symplekin/PTA1 N-terminal 102 321 IPR032460 -
Dod07g1535 1335 MobiDBLite consensus disorder prediction 951 983 - -
Dod07g1535 1335 MobiDBLite consensus disorder prediction 353 428 - -
Dod07g1535 1335 MobiDBLite consensus disorder prediction 1301 1335 - -
Dod07g1535 1335 MobiDBLite consensus disorder prediction 382 406 - -
Dod07g1535 1335 SUPERFAMILY ARM repeat 31 328 IPR016024 -
Dod07g1535 1335 Pfam Symplekin tight junction protein C terminal 1087 1265 IPR022075 -
Dod07g1535 1335 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1238 - -
Dod07g1535 1335 SUPERFAMILY ARM repeat 30 1040 IPR016024 -
Dod07g1535 1335 MobiDBLite consensus disorder prediction 935 983 - -
Dod07g1535 1335 MobiDBLite consensus disorder prediction 1301 1319 - -
Dod07g1535 1335 Gene3D - 2 346 IPR011989 -
Dod07g1535 1335 PANTHER SYMPLEKIN/PTA1-RELATED 1 1238 - -
Dod07g1535 1335 MobiDBLite consensus disorder prediction 407 428 - -
Dod07g1535 1335 MobiDBLite consensus disorder prediction 357 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1535 Dod-Chr7 41718572 41732207 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1535 K06100 - gmx:100779360 2068.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1535 07 41718572 41732207 Dod07g1535 07 41718572 41732207 ECH