Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1489 ATGACCATAGCAGAGGATAGTTTGCTTCAGGTTGTTGAGGAGGAAGAGGGTCCTCCTGAATCTGCTTTGCTTGACCCTGAGAACAATTCTAGGCCTCGTAGAATTGCTCTCTTTGTTGAGCCTTCTCCTTTTGCGTATGTCTCAGGATACAAAAATCGGTTTCAGAATTTTATAAAATACCTTCGTGAAATGGGAGATGAGGTAATGGTTGTGACAACACATGAAGGAGTACCCAAGGAATTTTATGGGGCCAAATTAATTGGATCTCGAAGCTTTCCTTGTCCCTGGTATCAGAAGGTGCCCCTCTCTTTGGCACTTAGTCCAAGAATAATTTCAGCAGTTGCTCAGTTTAAGCCTGACATTATACATGCTTCATCACCTGGAATAATGGTTTTTGGTGCTCTTATCATTGCGAAGCTTCTTAGTGTTCCCATTGTCATGTCCTATCATACTCATGTACCCGTATACATTCCAAGATATACCTTTAGCTGGCTGGTGCAACCCATGTGGTTGGTCATAAAATTTCTGCATAGAGCAGCTGATTTAACACTGGTGCCATCAGCTGCCATTGGAAGGGATCTCGAAGCAGCTAGAGTAACAGCAGCTAACAAGATTCGTCTATGGAACAAGGGTGTTGATTCGGACAGTTTCCATCTCCGATTCAAGTCTGATGAAATGCGATTAAGACTGAGCAATGGTGAACCTGAGAGGCCCTTGATAGTTCATGTTGGACGGCTTGGAGTTGAGAAGAGTTTAGATTTTCTCAAAAGCATCATGGATAGGCTTCCTGAAGCTCGAATTGCTTTCATTGGAGATGGACCATACAGGGAGGAGCTGGAAAAAATGTTTGAGGGTATGCCTGCAGTATTCACAGGAATGTTAGGAGGGGAGGAGCTCTCCCAAGCATATGCCAGTGGAGATGTCTTTGTGATGCCTTCGGAGTCAGAAACACTCGGCCTTGTTGTTTTGGAGGCCATGTCTTCAGGTATTCCGGTGGTGGGAGCACGTGCTGGCGGAATCCCAGATATAATCCCTGACGATCAAGACGGCAAAATTGGCTACCTCTACACTCCAGGTGATCTTGAAGACTGCTTGAGCAAATTGAAGCCTCTGTTGCATGACAAGGAGTTGAGGGAAACCATGGGAAAAGCCGCACGTTTGGAGATGGAGAAGTATGACTGGAGAGCAGCCACCAGAACAATTCGCAATGAAAACTACAATGCCGCCATTTGGTTCTGGCGCAAGAAAAGGGCTCAGCTGTTGGGACCCTTCCAATGGCTGGCTAAACGGATTTTTCCATCTCCAGAAGTCAATGTATAG 1320 0.4561 MTIAEDSLLQVVEEEEGPPESALLDPENNSRPRRIALFVEPSPFAYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPKEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISAVAQFKPDIIHASSPGIMVFGALIIAKLLSVPIVMSYHTHVPVYIPRYTFSWLVQPMWLVIKFLHRAADLTLVPSAAIGRDLEAARVTAANKIRLWNKGVDSDSFHLRFKSDEMRLRLSNGEPERPLIVHVGRLGVEKSLDFLKSIMDRLPEARIAFIGDGPYREELEKMFEGMPAVFTGMLGGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGARAGGIPDIIPDDQDGKIGYLYTPGDLEDCLSKLKPLLHDKELRETMGKAARLEMEKYDWRAATRTIRNENYNAAIWFWRKKRAQLLGPFQWLAKRIFPSPEVNV* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1489 439 Pfam Glycosyl transferases group 1 236 387 IPR001296 GO:0016757
Dod07g1489 439 PANTHER SULFOQUINOVOSYL TRANSFERASE SQD2-LIKE 13 438 - -
Dod07g1489 439 Pfam Glycosyltransferase Family 4 52 215 IPR028098 -
Dod07g1489 439 PANTHER SULFOQUINOVOSYL TRANSFERASE SQD2 13 438 - -
Dod07g1489 439 Gene3D Glycogen Phosphorylase B; 212 392 - -
Dod07g1489 439 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 35 401 - -
Dod07g1489 439 CDD GT4-like 34 399 - -
Dod07g1489 439 Gene3D Glycogen Phosphorylase B; 48 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1489 Dod-Chr7 40764888 40768694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1489 7 355 Glycosyltransferase AT5G01220 80.802 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1489 K06119 - gmx:100780899 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1489 07 40764888 40768694 Dod07g1489 07 40764888 40768694 ECH
Dod01g1164 01 23750065 23756784 Dod07g1489 07 40764888 40768694 PCT