Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1347 ATGGAACGCCGGAAAACGCTCAAAATGACCTGGGACGGCCTCGGCGACGACGATGACAACGACGACCGGTTCTTCGAGTCCTACGACCGTCTCTCGTGCGCAGTCCCCCTCGACCTCGCTTCTTCCTCCGACGATGACGATTTCGACGATCCCCGAACCTCCTTTGCCTCCGCCATCTCCTCTGTTCACGCCACCAAAAACAGAGCATTCTCGCAGGCCGGGGCCAGAACCTCCGTCGATCAGGCCCCGGACTACCAGATATGGATGGCTGCCCCCACTTCCATCACCGAGCGACGGAAGCAGTTGCTCCACGGAATGGGACTCAACGAAAACCGAGAGTTCTTGGCCACCAGCGTCCAGCTTGGCCACGCAATCTCGAAGAAGTTCGAGAATGGGAACAATGCTTGTGTCTCAGTTTCTTCAGACAAGAAACTTTTGGGTGTTGGTGTTGGTGTTGGTGGTGGTGGTGGTGCTGCTGCATCGTCTATAACCGTTGCTTCCTCTGTTTCCCCTGTTTTCTCAGGGGGTAAACCAGAGCATCCCTCTGTTTCGTTCGTTCTCGTCCGGTCGAGGTCCGAGGGCGACATCGATTCATTTTCGATGGAGAAGTTAAGGAAACAGGAGTTGATTGGGAAGGTTTCGAAGCAGCGCCTCACGAGGACGGCCACGCAGATAGCCGTGCCTCATGCCAAGATGATACCATATGTGAAGGTGGTCGCCAAGGATGCCGATGAGGCGGCGCAATTGAAGCAGCACGGCCCGAAACTGTCTTCCGTCATGGCGGAAACCGGCGTGGGGGCGTTCTTCCTGATCAAGAATTTGGACACGGGGAAGGAATTCATTGTCAATGAGTATGGTGAGAATGGGACGTGGAACAGGCTCAGTGACCTGCAGACTGGGAAGCAGTTAACCATGGAGGAATTCGAGAAGACGGTGGGGCACTCGCGTCTCGTGAACGAGCTCATGAGGCGCGTGAACGTGGCGAGCGGATACTCGAGGAAACTCTGCTCAAGCTCTTACATTTCTAGGAGCCTGAGGTTGAGCAAGAGGAGAGGTGCTGAATTGCTGAAGAATATAAAAGGCGTGGCGAGCGGGTTCATCGGCGAAAGAGAGAGGGAAACGACGCCGATGCAGCTGCACCAGCAGGTTGTGGTGGAGGCGAAGCCGGTGAAGAATAGGTGGGTGAAGGTGAGGCAGAGTGGCAAGTCGCACAAGGAGCTTTCTGCTTTGCATTTGTGCCAAGAGATTCAGGCTCATGAGGGTTGCATTTGGAGCATTAAGTTCAGCTCTGATGGGAGGTTCTTGGCAAGTGCTGGTGAGGATAAGGTGATTCATGTTTGGGAAGTGCATGAGTGTGAGGTTTTGTCTATGAGGCTGGAGGAAGGGAACCTTACCCCAATTCATCCATCGTTGCTTGCTCCCATGGAGCGAAGTGCGCAAGGGGAGGCTCCACCTTTGTCCGCTGAGAAGAAGAAGAAGGGCATGTTTGGAAGCAAGAGAGCGGAAGACGCCATTCCGGATTATGTTCATGTGCCTGAAACTGTGTTCTCACTTTCTGATAAACCATTTTGCTCTTTCAATGGTCATTTGGATGAGGTTCTGGATTTGTCATGGTCTAAATCTCAGCTGCTACTTTCATCTTCAATGGATAAAACAGTGAGACTATGGGACTTGGAAACTAAGACTTGTTTGAAGATGTTTGCTCATAATGACTATGTAACCTGCATACAATTCAATCCTATAGACGAAGATTATTTCATAAGTGGCTCCCTTGATGCTAAGGTCAGAATATGGAACATTCCTGAACGCCATGTTGTGGATTGGACCGACATCCATGAAATGGTTACTGCAATTTCTTACACACCTGATGGTCAAGGTGCTCTTGTTGGTACACAAAAAGGAGGTTGTCGTACCTATAGCACAGCAGGTTGCAAATTAAGGCAAACAGGCACGATTGAAATTCGTCGCAAGAGGAAATCTCATCTAAGAAAGATCACTGGTTTCCAGTTTTCCGCAGGAAATCCCTCACAAGTACTTGTTACTTCAGCTGACTCCAGAATAAAAGTTTTGGATGGCTCAGAGGTTGTTCAGAAGTTTAAAGGATTTCGAAATGCGAATAGCCAAATTGCAGCTTCATTTAGTCCAAATGGAAGATATATTGTAAGTGCAAGTGAAGATTCACAGGTATACATATGGAAGCATCGAGAGCATGGAAGTGCAGGCACCGGAAAAGGTAGAACTATCCGCGTTACCCAGTCTCATGAGTACTTCCAATGTAAAGATGTTTCAATAGCAATACCATGGCCTTATACCATAAGGGGTGACCCCCCACCAGTGCAACATTCCAAACGGTATTCAAAGCGTGCTCAGGCACCTTCTAGTAGTGTGGATGACACCACAGCTTATGCAAACAGTCGAAGATTGCTTCCACCCCTTCCCAAGAAAAGTAATAACCATGCCACAGAAAGTGCCTTAACTGCCCCAGATGAAGATCCTGCAGCAATTTCACACACAGGATCTGGACTTGGTGATTCTTTTGCAAACAGTAAGAGAATGTTGCCACCTCTTCCCAAGAAAACTAACTTCCAAGCCACAGAAAGTGCCTCAACTCAGACCGAGGAAGAAGACCTTGATGCGATTTCGCACACGGATTCAGGAGTTGGTGATTCATTTAGATCAGGTTCTGCCTCTATTCGATATGGTGATTCGCCTTCTATATCTGCTGCTGCCACTCCATCATCTGCATCTTGGTCTTCCAATTATTCATCACTTGAAGGTAGTCAAGGTTCCTCAGTAATTCATCCTTCGGCATGGGGCTTGGTAATTGTGACAGCCGGGTATGGAGGCGAAATCAGATGTTATCAGAATTTCGGGTTACCTCACGGATGA 2889 0.4915 MERRKTLKMTWDGLGDDDDNDDRFFESYDRLSCAVPLDLASSSDDDDFDDPRTSFASAISSVHATKNRAFSQAGARTSVDQAPDYQIWMAAPTSITERRKQLLHGMGLNENREFLATSVQLGHAISKKFENGNNACVSVSSDKKLLGVGVGVGGGGGAAASSITVASSVSPVFSGGKPEHPSVSFVLVRSRSEGDIDSFSMEKLRKQELIGKVSKQRLTRTATQIAVPHAKMIPYVKVVAKDADEAAQLKQHGPKLSSVMAETGVGAFFLIKNLDTGKEFIVNEYGENGTWNRLSDLQTGKQLTMEEFEKTVGHSRLVNELMRRVNVASGYSRKLCSSSYISRSLRLSKRRGAELLKNIKGVASGFIGERERETTPMQLHQQVVVEAKPVKNRWVKVRQSGKSHKELSALHLCQEIQAHEGCIWSIKFSSDGRFLASAGEDKVIHVWEVHECEVLSMRLEEGNLTPIHPSLLAPMERSAQGEAPPLSAEKKKKGMFGSKRAEDAIPDYVHVPETVFSLSDKPFCSFNGHLDEVLDLSWSKSQLLLSSSMDKTVRLWDLETKTCLKMFAHNDYVTCIQFNPIDEDYFISGSLDAKVRIWNIPERHVVDWTDIHEMVTAISYTPDGQGALVGTQKGGCRTYSTAGCKLRQTGTIEIRRKRKSHLRKITGFQFSAGNPSQVLVTSADSRIKVLDGSEVVQKFKGFRNANSQIAASFSPNGRYIVSASEDSQVYIWKHREHGSAGTGKGRTIRVTQSHEYFQCKDVSIAIPWPYTIRGDPPPVQHSKRYSKRAQAPSSSVDDTTAYANSRRLLPPLPKKSNNHATESALTAPDEDPAAISHTGSGLGDSFANSKRMLPPLPKKTNFQATESASTQTEEEDLDAISHTDSGVGDSFRSGSASIRYGDSPSISAAATPSSASWSSNYSSLEGSQGSSVIHPSAWGLVIVTAGYGGEIRCYQNFGLPHG* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1347 962 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 416 449 - -
Dod07g1347 962 ProSiteProfiles Intein N-terminal splicing motif profile. 680 758 IPR006141 GO:0016539
Dod07g1347 962 SMART WD40_4 519 557 IPR001680 GO:0005515
Dod07g1347 962 SMART WD40_4 601 640 IPR001680 GO:0005515
Dod07g1347 962 SMART WD40_4 692 733 IPR001680 GO:0005515
Dod07g1347 962 SMART WD40_4 651 691 IPR001680 GO:0005515
Dod07g1347 962 SMART WD40_4 560 599 IPR001680 GO:0005515
Dod07g1347 962 SMART WD40_4 409 448 IPR001680 GO:0005515
Dod07g1347 962 ProSiteProfiles Trp-Asp (WD) repeats profile. 566 600 IPR001680 GO:0005515
Dod07g1347 962 ProSiteProfiles Trp-Asp (WD) repeats profile. 712 733 IPR001680 GO:0005515
Dod07g1347 962 ProSitePatterns Trp-Asp (WD) repeats signature. 435 449 IPR019775 -
Dod07g1347 962 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 566 600 - -
Dod07g1347 962 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 526 560 - -
Dod07g1347 962 ProSiteProfiles Trp-Asp (WD) repeats profile. 526 566 IPR001680 GO:0005515
Dod07g1347 962 ProSitePatterns Trp-Asp (WD) repeats signature. 544 558 IPR019775 -
Dod07g1347 962 MobiDBLite consensus disorder prediction 786 802 - -
Dod07g1347 962 Pfam WD domain, G-beta repeat 522 557 IPR001680 GO:0005515
Dod07g1347 962 Pfam WD domain, G-beta repeat 699 733 IPR001680 GO:0005515
Dod07g1347 962 Pfam WD domain, G-beta repeat 415 447 IPR001680 GO:0005515
Dod07g1347 962 Pfam WD domain, G-beta repeat 562 599 IPR001680 GO:0005515
Dod07g1347 962 Gene3D - 292 458 IPR015943 GO:0005515
Dod07g1347 962 MobiDBLite consensus disorder prediction 775 890 - -
Dod07g1347 962 PRINTS G protein beta WD-40 repeat signature 435 449 IPR020472 -
Dod07g1347 962 PRINTS G protein beta WD-40 repeat signature 544 558 IPR020472 -
Dod07g1347 962 PRINTS G protein beta WD-40 repeat signature 586 600 IPR020472 -
Dod07g1347 962 PANTHER WD REPEAT DOMAIN 44 7 961 IPR040324 -
Dod07g1347 962 ProSiteProfiles Trp-Asp (WD) repeats profile. 416 457 IPR001680 GO:0005515
Dod07g1347 962 Gene3D - 506 762 IPR015943 GO:0005515
Dod07g1347 962 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 7 961 - -
Dod07g1347 962 SUPERFAMILY WD40 repeat-like 410 745 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1347 Dod-Chr7 36648885 36653015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1347 523 733 Miscellaneous Gene Families AT5G08390 24.424 1.76e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1347 K20241 - gmx:100779364 1157.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1347 07 36648885 36653015 Dod07g1347 07 36648885 36653015 ECH