Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1179 ATGGGTTCAGAAGGACAACCCAGGCTTCCTGTTCTTGATTTCACCAAGGAAGATTTGAAGCCAGGGACAAATTCCTGGTTATCAACATGCAAGAGTGTGCGCCAAGCTCTTGAAGAGCATGGCTGCTTTGTAGTTATGTTTGATAGAGCTTCTGATGAGCTTCAAAACGGTGTATTCAGCTCCCTGAAGCAGCTGTTCGGTCTCTCAACAGAAACCAAAATGGGGAACAGATATGAGGGCAAGCCCTTGAAAGGCTACGTTGGACAGCACCCCAACATTCCTCTCCATGAAAGCATGGGCATAGATGAGGGAACAACGCTTGAGGGGATTCAAAGTTTCGCTCAAAAAATGTGGCCTAATGGAAATGATCAATTCTGCAAATATTTGTTTGAGTATGCAAAGATGGCAGAAGAACTGGATCAAACGGTGGCAAGAATGATATTTGAAAGTTATGGTCTGGAAGAGTACTACGACGCATACAAAGGGTCTTCAAGTTATCTGCTTCGGTTCTTGGAGCATAAAGCCCCCAAACAGGTCGAGCCTCAACTGGGTTTTGTGTCTCACACTGACAAGAGCTTCACAACAATTCTTCACCAGAACCATGTCAATGGACTCATGGTGGAGACAAAGGATGGGAGCTGGATCGATGTTGATTTCTCTTCACCTACTTCGTTTGTTGTCATGGCTGGCGATGGCCTCATGGCTTGGAGCAACAACAGAATAAAGTCGCCTAATCATAAAGTTGTGATGAATGGGAATGAAACGAGGTACTCGCTTGGTCTGTTTGCCTTCTACAGAGGGATTCTACAAGTACCTGAAGAGCTGATAGATGACGATCACCCATTGCGGTTTAAGCCCTTTGATCATCTTGGATTATTGAACTTCGGTTACAGTATTAACATTAACGACTATTGTGGCGTGTGA 924 0.447 MGSEGQPRLPVLDFTKEDLKPGTNSWLSTCKSVRQALEEHGCFVVMFDRASDELQNGVFSSLKQLFGLSTETKMGNRYEGKPLKGYVGQHPNIPLHESMGIDEGTTLEGIQSFAQKMWPNGNDQFCKYLFEYAKMAEELDQTVARMIFESYGLEEYYDAYKGSSSYLLRFLEHKAPKQVEPQLGFVSHTDKSFTTILHQNHVNGLMVETKDGSWIDVDFSSPTSFVVMAGDGLMAWSNNRIKSPNHKVVMNGNETRYSLGLFAFYRGILQVPEELIDDDHPLRFKPFDHLGLLNFGYSININDYCGV* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1179 307 Pfam 2OG-Fe(II) oxygenase superfamily 168 263 IPR044861 -
Dod07g1179 307 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 3 305 - -
Dod07g1179 307 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 305 - -
Dod07g1179 307 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 89 IPR026992 -
Dod07g1179 307 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 163 267 IPR005123 -
Dod07g1179 307 Gene3D - 2 295 IPR027443 -
Dod07g1179 307 SUPERFAMILY Clavaminate synthase-like 7 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1179 Dod-Chr7 30156079 30158634 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1179 129 285 Glycosyltransferase AT5G59530 28.049 2.05e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1179 - - gmx:100809268 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2202 01 59193628 59195472 Dod07g1179 07 30156079 30158634 PCT
Dod07g1179 07 30156079 30158634 Dod01g2204 01 59236415 59239080 PCT