Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0773 ATGGTGTGGACTATGGAGTTTAGAATGCTTTTCTCATGTGTATATGCCCAAAGAGAGATTAATGTCATTTTTCTGGCTGTTGCAAACTCAACATCAGCAACATTCTTACGTGTTGTTGGTAGTGAATTGATACAAAAATACTTGGGAGATGGTCCAAAGCTTGTTAGGGAACTTTTCAGAGTTGCTGATGATCTATCCCCTTCTATTGTCTTCATTGATGAAATTGATGCAGTTGGTACAAAGAGGTATGATGCACACTCAGGTGGAGAACGTGAAATTCAGAGGACCATGTTAGAGCTGCTGAACCAGTTAGATGGTTTTGATTCAAAAGGAGATGTAAAAGTGATCCTTGCAACCAACCGAATTGAAAGTCTTGATCCAGCTTTGCTAAGACCTGGTCGAATAGACAGGAAGATAGAATTTCCTCTTCCTGATATCAAAACAAGAAGACGCATTTTCCAGATACACACATCAAGGATGACATTGGCTGATGATGTCAACTTGGAAGAATTTGTTATGACTAAGGATGAATTCTCTGGAGCTGATATAAAGGCAATATGTACTGAAGCTGGCTTACTTGCTCTACGAGAACGACGGATGAAGGTGACTCATGCCGACTTCAAGAAGGCAAAGGATAAAGTGATGTTTAAGAAGAAAGAAGGCGTACCAGAAGGACTGTATATGTGA 687 0.4003 MVWTMEFRMLFSCVYAQREINVIFLAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSKGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHADFKKAKDKVMFKKKEGVPEGLYM* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0773 228 Gene3D - 148 222 - -
Dod07g0773 228 CDD AAA 26 143 - -
Dod07g0773 228 Pfam ATPase family associated with various cellular activities (AAA) 25 143 IPR003959 GO:0005524|GO:0016887
Dod07g0773 228 Gene3D - 22 144 IPR027417 -
Dod07g0773 228 Pfam AAA+ lid domain 165 209 IPR041569 -
Dod07g0773 228 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 25 228 - -
Dod07g0773 228 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 4 HOMOLOG 25 228 IPR035244 GO:0036402
Dod07g0773 228 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 221 IPR027417 -
Dod07g0773 228 ProSitePatterns AAA-protein family signature. 113 131 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0773 Dod-Chr7 10933579 10936662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0773 26 213 Miscellaneous Gene Families AT5G58870 42.487 6.98e-38 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0773 K03062 - gmx:100802442 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2622 01 65502050 65507353 Dod07g0773 07 10933579 10936662 PCT