Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0753 ATGTTGGGTGTGGGGCAGGTGTCCGTGGATTTCTTGGCTAACGTTGCTTCTTATCCTAAGCCTGATGACAAAATCAGAACCATCAACTTGAAGGTTCAAGGAGGTGGCAATACAAGCAATGCTTTAACCTGTGTGGCTCGCTTGGGCCTCAAGCCAAGGGTCATCTCCAAGATTTCAGATGATAGTCAAGGCAGGGGCATTTTAGATGAATTACAGGCTGATGGTGTAGATACATCTTTTATTGTGGTATCCAAGGGGGGAACTTCACCATTTACATATATTATCGTGGACAACCAAACGAAGACCCGTACTTGTATACATACCCCAGGGTATCCCCCTATGATACCAGAGGATCTTTCAGAGTCGAGTTTGTTATCTGCATTGGATGGAGCAAGAATTGCCTACTTTGATGGGAGGTTATATGAAACTGCTCTTCTTGTTGCCCATGAGGCAGTTAGGAAGAATATACCCATCCTAATTGATGCAGAAAGGCCGAGGGAAGGGTTGGATGATCTCCTGAAATTGGCCGACTATGTTGTGTGCTCAGCAAAGTTTCCGCTGGCATGGACCTTGGCATCGACCATTCCACAAGCACTTGTTTCTATCCTTTTAAGATTGCCCAACATCAAATTCGTGATTGTGACTTTGGGAAAAGACGGTTGCATAATGCTTGAGAGAAGTATTAATGCAGGTCCTTCCACAGAAGAAGTTGATGTAGACAGCTTAGTGGAATCGCTGGAGATGAGAAGGAACAAGAGTGCATCCATTCCAACCTGTTTATCATCATCAGTAGCAAGATTGAAGGCAGAAGGGATAGGAACAGTTGATGGGAGGTTATACCTTGGAACTGCAGAGAGCATTCCTCCATCCGAGCTTATTGATACCACTGGTGCTGGGGATGCATTTATTGGTGCTGTTCTCTATGCTATCTGTGCCAAGTTTTCACCGGAGTCAATGCTATCCTTTGCTGCTTCTGTGGCAGCTGCCAAGTGCAGACTCTTAGGAGCTCGAAGTGGTCTTCCTTACCGTGCAGACCAACGCATAGCATCCTTTATGCAGCAGATTGTCCAGCTGTAG 1077 0.4578 MLGVGQVSVDFLANVASYPKPDDKIRTINLKVQGGGNTSNALTCVARLGLKPRVISKISDDSQGRGILDELQADGVDTSFIVVSKGGTSPFTYIIVDNQTKTRTCIHTPGYPPMIPEDLSESSLLSALDGARIAYFDGRLYETALLVAHEAVRKNIPILIDAERPREGLDDLLKLADYVVCSAKFPLAWTLASTIPQALVSILLRLPNIKFVIVTLGKDGCIMLERSINAGPSTEEVDVDSLVESLEMRRNKSASIPTCLSSSVARLKAEGIGTVDGRLYLGTAESIPPSELIDTTGAGDAFIGAVLYAICAKFSPESMLSFAASVAAAKCRLLGARSGLPYRADQRIASFMQQIVQL* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0753 358 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 294 307 IPR002173 GO:0016773
Dod07g0753 358 Gene3D - 1 338 IPR029056 -
Dod07g0753 358 CDD ribokinase_group_B 2 342 - -
Dod07g0753 358 Pfam pfkB family carbohydrate kinase 284 341 IPR011611 -
Dod07g0753 358 Pfam pfkB family carbohydrate kinase 4 226 IPR011611 -
Dod07g0753 358 SUPERFAMILY Ribokinase-like 2 345 IPR029056 -
Dod07g0753 358 PRINTS Ribokinase signature 30 49 IPR002139 GO:0016301
Dod07g0753 358 PRINTS Ribokinase signature 212 223 IPR002139 GO:0016301
Dod07g0753 358 PRINTS Ribokinase signature 3 24 IPR002139 GO:0016301
Dod07g0753 358 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 2 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0753 Dod-Chr7 10485411 10491842 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0753 - - mtr:MTR_1g069320 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0753 07 10485411 10491842 Dod07g0753 07 10485411 10491842 ECH
Dod01g2604 01 65260678 65261814 Dod07g0753 07 10485411 10491842 PCT