Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0607 ATGGCGGGAAAAGGAGGGAAGGGGCTGCTTGCGGCGAAAACAACGGCCGCGAACAAGGACAAAGACAAGGAGAAGGATAAGAAGAGGCCGGTTTCCCGGTCATCCCGTGCCGGAATCCAGTTCCCTGTGGGGCGTATCCATAGACAGTTGAAACAAAGGGTCCAAGCCAATGGACGTGTTGGTGCCACTGCTGCTGTTTACTTGGCCTCAATTCTTGAGTACCTGACCGCTGAGGTTCTTGAACTTGCCGGAAACGCAAGCAAAGATCTGAAGGTGAAGAGGATAACACCAAGGCACTTGCAGCTTGCCATCAGAGGAGATGAGGAGCTGGACACCCTCATCAAAGGGACCATTGCTGGTGGTGGTGTCATCCCACACATTCACAAGTCCTTGATCAACAAAACCTCCAAGGAATGA 417 0.5252 MAGKGGKGLLAAKTTAANKDKDKEKDKKRPVSRSSRAGIQFPVGRIHRQLKQRVQANGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTSKE* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0607 138 Pfam C-terminus of histone H2A 108 137 IPR032454 -
Dod07g0607 138 MobiDBLite consensus disorder prediction 16 33 - -
Dod07g0607 138 Pfam Core histone H2A/H2B/H3/H4 12 106 IPR007125 GO:0003677
Dod07g0607 138 CDD H2A 29 134 IPR002119 GO:0000786|GO:0003677|GO:0030527
Dod07g0607 138 PANTHER HISTONE H2A 2 136 IPR002119 GO:0000786|GO:0003677|GO:0030527
Dod07g0607 138 SMART h2a4 18 138 IPR002119 GO:0000786|GO:0003677|GO:0030527
Dod07g0607 138 MobiDBLite consensus disorder prediction 1 38 - -
Dod07g0607 138 Gene3D Histone, subunit A 17 138 IPR009072 GO:0046982
Dod07g0607 138 PRINTS Histone H2A signature 59 74 IPR002119 GO:0000786|GO:0003677|GO:0030527
Dod07g0607 138 PRINTS Histone H2A signature 74 87 IPR002119 GO:0000786|GO:0003677|GO:0030527
Dod07g0607 138 PRINTS Histone H2A signature 88 102 IPR002119 GO:0000786|GO:0003677|GO:0030527
Dod07g0607 138 PRINTS Histone H2A signature 115 133 IPR002119 GO:0000786|GO:0003677|GO:0030527
Dod07g0607 138 PRINTS Histone H2A signature 29 51 IPR002119 GO:0000786|GO:0003677|GO:0030527
Dod07g0607 138 PANTHER HISTONE H2A 2 136 - -
Dod07g0607 138 SUPERFAMILY Histone-fold 18 115 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0607 Dod-Chr7 8142001 8144725 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0607 K11251 - gmx:100782374 224.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2469 01 63660884 63662787 Dod07g0607 07 8142001 8144725 PCT