Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0546 ATGCAACGGTTCAAGGAAGTTGTTACCTGTATTGAATGCTCTGCAGCTACACTGTATCAGGTCCCTGAAGTTTTCTATTTTGCCCAAAAAGCAGTGCTGCATCCAGTAGACCCATTGTTTGATTATGAAAGAAATGCTTTAACAGATCGATGTATAAGGGCATTAAGAAGAATATTTGTACTTTGTGATCAAGACATGGATGGTGCCCTCAATGATGAAGAACTAAATGAGTATCAGGTTAGATGCTTCAATGCACCATTGCAGCCATCTGAAATAGCAAGAATCAAAACACTTGTGGAGCAGAGAGTACCTGAAGGAGTCAACTCTATCGGGCTTACTTTTCCCGCCTTTATTTATGTCCATAATATGTTTCTAAAGAAAGGACGTACTGAGACATTTTGGGCTGTTCTAAGAAAGTTTGGATATGATAATGATTTAAAACTCCGGGATGATTTCCTTCCAGTTCTGCCTAAGAAGGCTTCTGATCAGAGTGTGGAGCTGACTAGTGAAGCTATAGAGTTTCTGAGTGGCATCTTTCGATTGTTTGACACAGATAAAGATCGATTCCTACGACCTACAGAGGTTGATAAGCTCTTTGATACTGCTCCAGAAAGCCCATGGAATGATGCTCCATATAAGGATGCAACAGAGAAGACTGAGAGGGGTTATGTATCTCTGAAGGGATTTCTGTCTCAGTGGGCCCTTATGACATTACTTGATCCACCACATAGCTTGGCTAATTTGATTTACATTGGATATAGTGGTAATCCTGCTGCAGCACTTCATGTTACTCGCAGAAGATCAGTAGATCGCAAGAAGCAAACAACAGAAAGAAATGTCTTCCAATGCTATGTTCTTGGTTCTAAAAATGCTGGGAAATCTGCTTTGCTGTATTCATTATTGCGAAGGCCTTTCTCAAATAACTATACTCCAACAATAGTTGAGCAGTATGCAGCAAATTTCGTTGAATTAATAGGGGGAACTAGGAAAACTCTCATATTGCGCGAGATACCAGAGGATGGAGTATCAAAATTTTTGTCAAATCAGAATTGTTTGGCTGCATGTGATGTAGCTGTTTTTGTGTATGACAGCTCAGATGAATATTCATGGAAGAAATCAAGAGATTTGCTTGAGATGGTTGTTAGACAAGGAGAATTAACTAGTTATAGAGTTCCTTGCCTCCTCATTGCTGCTAAGGATGATTTAACTCCATACCCAAGAGCAGTACTAGATTCTGTAAAGGTTACTCGAGAATTGGGAATAGAGGCACCTATTCACATAAGCATGAAATTAGGTGATTCAAGTTATGTCTATAAGAAGATTGTCAATGCAGCAGAACACCCGCATTTGAACATTCCAGAAACTGAGACTACAAGGAAAAGAAAGCAACAGCAGCAGCTTCTCTACCAATCTCTAATTTTTGGCTTAGTTGGAGCTGCTATGGTGGCAGTTGGTTTGTCAGTGAGCCGGGCACGTGCGGTGAAGAAAAATTCTTCTGCTTAA 1503 0.4012 MQRFKEVVTCIECSAATLYQVPEVFYFAQKAVLHPVDPLFDYERNALTDRCIRALRRIFVLCDQDMDGALNDEELNEYQVRCFNAPLQPSEIARIKTLVEQRVPEGVNSIGLTFPAFIYVHNMFLKKGRTETFWAVLRKFGYDNDLKLRDDFLPVLPKKASDQSVELTSEAIEFLSGIFRLFDTDKDRFLRPTEVDKLFDTAPESPWNDAPYKDATEKTERGYVSLKGFLSQWALMTLLDPPHSLANLIYIGYSGNPAAALHVTRRRSVDRKKQTTERNVFQCYVLGSKNAGKSALLYSLLRRPFSNNYTPTIVEQYAANFVELIGGTRKTLILREIPEDGVSKFLSNQNCLAACDVAVFVYDSSDEYSWKKSRDLLEMVVRQGELTSYRVPCLLIAAKDDLTPYPRAVLDSVKVTRELGIEAPIHISMKLGDSSYVYKKIVNAAEHPHLNIPETETTRKRKQQQQLLYQSLIFGLVGAAMVAVGLSVSRARAVKKNSSA* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0546 500 Pfam Ras family 284 404 IPR001806 GO:0003924|GO:0005525
Dod07g0546 500 ProSiteProfiles EF-hand calcium-binding domain profile. 170 205 IPR002048 GO:0005509
Dod07g0546 500 Pfam EF hand associated 86 170 IPR013567 -
Dod07g0546 500 PANTHER RHO FAMILY GTPASE 1 348 IPR003578 GO:0005525|GO:0007264
Dod07g0546 500 CDD Miro2 277 459 - -
Dod07g0546 500 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 277 450 IPR027417 -
Dod07g0546 500 Gene3D - 148 338 - -
Dod07g0546 500 PANTHER MITOCHONDRIAL RHO GTPASE 1 348 - -
Dod07g0546 500 Gene3D - 42 146 - -
Dod07g0546 500 SUPERFAMILY EF-hand 38 234 IPR011992 -
Dod07g0546 500 Gene3D - 345 446 IPR027417 -
Dod07g0546 500 Pfam EF hand associated 207 274 IPR013566 -
Dod07g0546 500 ProSiteProfiles Miro domain profile. 278 447 IPR020860 GO:0003924|GO:0005525
Dod07g0546 500 ProSitePatterns EF-hand calcium-binding domain. 63 75 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0546 Dod-Chr7 7215844 7239328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0546 1 498 EF-hand Containing Proteins AT3G63150 57.430 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0546 K07870 - gmx:100806983 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0546 07 7215844 7239328 Dod07g0546 07 7215844 7239328 ECH
Dod01g2413 01 62903540 62913271 Dod07g0546 07 7215844 7239328 PCT