Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0185 ATGGGATCGTCGCTATCGAACCTCGGAACGAATGGTTCAACGATCGGTCCAGGCCTCGGCGACATCCCGGAGGGATGTGTGGCGCGCGTGTTCCTCCACCTCTCCCCGCCGGAGATCTGCAACCTCGCCCGCCTCAACCGCGCCTTCCGCGGCGCCGCCTCCGCCGACTCCGTCTGGGAATCCAAGCTCCCTCCCAACTACCAAGATCTCGTCGATCTCGTTCCTCCCGAGAGGCACTACAATCTCTCAAAGAAGGACGTTTTCGCTTTGCTCTCTAAGCCCGTGCCATTCGATGACGGCAATAAGGAAGTGTGGCTGGACAGGGAAACTGGAAGGGTTTGCATGTCAATTTCGGCAAAGGCGATGGCAATTACTGGAATCGATGACCGGAGATACTGGAATTGGACTCCTACTGAAGAATCTAGGTTCCACACCGTAGCATATTTGCAGCAAATATGGTGGTTTGAAGTGGATGGGGAGGTAAAGTTTCCATTTCCTCCCGATATATATACTCTCTCCTTTAGACTTCACCTTGGACGGTTTTCTAAAAGGCTTGGACGGCGTGTATGCAATTATGAACACACCCATGGCTGGGATATAAAACCTGTGAAATTTGAGTTGTCCACTTCAGATGGTCAGCAAGCATCATGCGAGTTCTGTTTGGCTGAAACTGAACTTGATGATGCATATGGCAACCATAAGCGCGGATGTTGGGTAGATTACAAGGTGGGTGAGTTTCTAGTCAGTGCATCAGAACCTATGAGTGAGGTTAGATTCTCCATGAAACAAATTGATTGTACACATTCCAAAGGTGGGCTTTGTGTAGATTCTGTATTCATTATACCTAGTGATTTGAGAGAGCGCAAGAGAAAAGGCGTTTTGAAATAG 888 0.4944 MGSSLSNLGTNGSTIGPGLGDIPEGCVARVFLHLSPPEICNLARLNRAFRGAASADSVWESKLPPNYQDLVDLVPPERHYNLSKKDVFALLSKPVPFDDGNKEVWLDRETGRVCMSISAKAMAITGIDDRRYWNWTPTEESRFHTVAYLQQIWWFEVDGEVKFPFPPDIYTLSFRLHLGRFSKRLGRRVCNYEHTHGWDIKPVKFELSTSDGQQASCEFCLAETELDDAYGNHKRGCWVDYKVGEFLVSASEPMSEVRFSMKQIDCTHSKGGLCVDSVFIIPSDLRERKRKGVLK* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0185 295 PANTHER F-BOX PROTEIN PP2-A15 1 293 - -
Dod07g0185 295 ProSiteProfiles F-box domain profile. 16 62 IPR001810 GO:0005515
Dod07g0185 295 SUPERFAMILY F-box domain 17 87 IPR036047 GO:0005515
Dod07g0185 295 PANTHER F-BOX PROTEIN PP2-A15 1 293 - -
Dod07g0185 295 Pfam Phloem protein 2 113 282 IPR025886 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0185 Dod-Chr7 2381614 2387304 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0185 - - vra:106772440 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0185 07 2381614 2387304 Dod07g0185 07 2381614 2387304 ECH
Dod01g2814 01 68306627 68309983 Dod07g0185 07 2381614 2387304 PCT