Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0178 ATGGAGTCTAGGCAACAATTCAAGGAAGAAGATCGAGCTGAGGAAACTGCAAAAGACCTTGAGGAAGTTAATAGAGCAAGAGACCATGATGTTGGTACCACTGCTATGGACCAACAACAACATGATCAGCAAAAGCCTGGTGTTGTTGGCTCAGTGATAAGGGCAGTGCATGACACCTATGAGAATGCAAAAGAAGCTGTGGTTGGCAAAAGGGACACCCCAGATTTGAATACTACAAGGGAAGAAGTGGTCTATGTTTCTGGGCGTGATGATGGAACTGGTGGTGAAGTGAGAGATATATCAGCAGGGAAAACAAAGGATTACACCAAGGAGGCCACAGACAAAGCAGGTTCCAAAGTTGGAGAGTACAAAGATTATGCAGGTCAAAAGGCCAAGGATGCAGAAGATGCTACAAAAGAAAAGGCTGATTATGCAGCTGAGAAGGCAAAGGACACAAAAGATGCTACAATGCAAAAGGCTGGTGAGTTCACAGATTATGCATCTCAAAAGGCCAAGGAAGCAAAGGATGCTACACAACAGAAAGCTGGTGAGTACACAGATTATGCATCACAGAAAGCAAAGGAAGCAAAGGATGCAACCATGGATAAGGCCAATGAAGCTAAGGACAAGACAATGGAGAAGGGTGGGGAGTACAAGGACTATGCTTCTGAGAAGGCAAAGGAAGGGAAGGACACTACATTTGGGAAGCTTGGGGAGCTGAAGGATTCTGCTGCTGATGCTGCAAAGAGGGCTATGGGTTACTTGGGAGCTAAGAAAGAGGAGACTAAGCAGAAGAGTGCAGAGACTTTGGAGGCGACAAAGAACAAGGCTTCAGATACCACCGAGGCTGCAAAGCAGAAGGGTAATGAGATGAAGGATGCAGCAACGGACAAGGCTGAAGAGACAACTGAGGCAGCCAAGCAGAGAACTGCAGAGGCAAAGGACAAGACCAAGGAAAATCTAAGCGGAGCAGAAGAAGAAGCAGGGAGGAAAATGGAAGAGGTGAAGGTGAACAAGAGAGATGAAACTGGGGACCGTGGAGGAAACAAGGCAACGCTAAGAGTGGAAGAGACACGACCAGGTGCAGTGGCTGAAACTCTCAAAGCAGCTGATCAGATGTCTGGGCAGACCTTCAACGACGTGGGACCTTTAGATGATGAAGGAGTTGTTCGTGTGGATCGCCGTGATGCTCGTCATAATATGTGA 1206 0.4718 MESRQQFKEEDRAEETAKDLEEVNRARDHDVGTTAMDQQQHDQQKPGVVGSVIRAVHDTYENAKEAVVGKRDTPDLNTTREEVVYVSGRDDGTGGEVRDISAGKTKDYTKEATDKAGSKVGEYKDYAGQKAKDAEDATKEKADYAAEKAKDTKDATMQKAGEFTDYASQKAKEAKDATQQKAGEYTDYASQKAKEAKDATMDKANEAKDKTMEKGGEYKDYASEKAKEGKDTTFGKLGELKDSAADAAKRAMGYLGAKKEETKQKSAETLEATKNKASDTTEAAKQKGNEMKDAATDKAEETTEAAKQRTAEAKDKTKENLSGAEEEAGRKMEEVKVNKRDETGDRGGNKATLRVEETRPGAVAETLKAADQMSGQTFNDVGPLDDEGVVRVDRRDARHNM* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0178 401 MobiDBLite consensus disorder prediction 256 360 - -
Dod07g0178 401 PANTHER EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE-RELATED 139 178 - -
Dod07g0178 401 PANTHER EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE-RELATED 158 202 - -
Dod07g0178 401 MobiDBLite consensus disorder prediction 1 35 - -
Dod07g0178 401 Coils Coil 190 210 - -
Dod07g0178 401 PANTHER EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE-RELATED 311 390 - -
Dod07g0178 401 PANTHER DAUER UP-REGULATED-RELATED 3 157 - -
Dod07g0178 401 Coils Coil 296 334 - -
Dod07g0178 401 MobiDBLite consensus disorder prediction 189 217 - -
Dod07g0178 401 MobiDBLite consensus disorder prediction 64 102 - -
Dod07g0178 401 MobiDBLite consensus disorder prediction 1 48 - -
Dod07g0178 401 MobiDBLite consensus disorder prediction 278 353 - -
Dod07g0178 401 Coils Coil 267 287 - -
Dod07g0178 401 MobiDBLite consensus disorder prediction 127 155 - -
Dod07g0178 401 MobiDBLite consensus disorder prediction 373 401 - -
Dod07g0178 401 MobiDBLite consensus disorder prediction 386 401 - -
Dod07g0178 401 Gene3D - 142 187 - -
Dod07g0178 401 Gene3D - 188 235 - -
Dod07g0178 401 Pfam Late embryogenesis abundant protein 281 323 IPR004238 -
Dod07g0178 401 Pfam Late embryogenesis abundant protein 142 178 IPR004238 -
Dod07g0178 401 Pfam Late embryogenesis abundant protein 197 240 IPR004238 -
Dod07g0178 401 Pfam Late embryogenesis abundant protein 164 207 IPR004238 -
Dod07g0178 401 PANTHER DAUER UP-REGULATED-RELATED 139 178 - -
Dod07g0178 401 PANTHER DAUER UP-REGULATED-RELATED 158 202 - -
Dod07g0178 401 MobiDBLite consensus disorder prediction 256 272 - -
Dod07g0178 401 PANTHER DAUER UP-REGULATED-RELATED 311 390 - -
Dod07g0178 401 PANTHER DAUER UP-REGULATED-RELATED 180 267 - -
Dod07g0178 401 PANTHER EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE-RELATED 180 267 - -
Dod07g0178 401 PANTHER EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE-RELATED 3 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0178 Dod-Chr7 2320785 2323396 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0178 - - aprc:113873399 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0178 07 2320785 2323396 Dod07g0178 07 2320785 2323396 ECH
Dod01g2810 01 68281695 68283614 Dod07g0178 07 2320785 2323396 PCT