Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0117 ATGGCTCTTACCTTTTTACTCTTTGCTATTTTACTCTTTGTGGCCCCTTCAAGCAATGCTTACTGGCCACCTTCACCTGGCTACTGGCCAAGTTCCAAATTCAGGCCTATGAGCTTTTACAAAGGGTTTAGAAACCTTTGGGGTCCTCAACACCAAAGACTAGATCAAAATGCATTAACAATTTGGCTTGATAGTACCTCAGGAAGTGGCTTCAAGTCAGTTAAGCCATTTAGATCAGGTTACTTTGGTGCTTCCATTAAGCTTCATCCAGGCTACACTGCAGGAGTTATAACATCTTTCTATCTTTCAAACAATGAAGCACACCCGGGCTTCCATGATGAAGTGGATATTGAGTTTCTTGGGACCACATTTGGGAAGCCTTATACTTTGCAGACTAATGTTTACATAAGAGGGAGTGGGGATGGGAGAATTATAGGCAGAGAGATGAAGTTCCACCTGTGGTTTGATCCTACCAAAGATTTTCATCACTATGCTATATTTTGGAGTCCTAAGGAAATAATATTCCTTGTGGATGATGTGCCCATAAGGAGGTACCCTAGGAAGAATGCAGCAACATTTCCACTTAGGCCAATGTGGCTTTATGGTTCAATATGGGATGCCTCATCATGGGCAACTGAGGATGGCAAGTACAAAGCTGACTACAGATACCAACCCTTTGTTGCAAGGTACACCAACTTCAAGGCTGTTGGTTGCTCAGCCTATGCCCCTACTTGGTGCCATCCAGTCTCAGCCTCCCCATATAGGTCTGGTGGGTTGACCAGACAACAATATAGGGCCATGAGATGGGTGCAAAGATACCACATGGTTTATAACTATTGCCAAGACCCCAAAAGAGACCATAGACTAACACCTGAGTGTTGGGGTTAA 888 0.4392 MALTFLLFAILLFVAPSSNAYWPPSPGYWPSSKFRPMSFYKGFRNLWGPQHQRLDQNALTIWLDSTSGSGFKSVKPFRSGYFGASIKLHPGYTAGVITSFYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGRIIGREMKFHLWFDPTKDFHHYAIFWSPKEIIFLVDDVPIRRYPRKNAATFPLRPMWLYGSIWDASSWATEDGKYKADYRYQPFVARYTNFKAVGCSAYAPTWCHPVSASPYRSGGLTRQQYRAMRWVQRYHMVYNYCQDPKRDHRLTPECWG* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0117 295 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 5 294 IPR044791 GO:0004553
Dod07g0117 295 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 5 294 - -
Dod07g0117 295 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 255 293 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Dod07g0117 295 Gene3D - 19 293 - -
Dod07g0117 295 SUPERFAMILY Concanavalin A-like lectins/glucanases 61 281 IPR013320 -
Dod07g0117 295 PIRSF EndGlu_transf 3 295 IPR016455 GO:0010411|GO:0016762|GO:0042546
Dod07g0117 295 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 18 230 IPR000757 GO:0004553|GO:0005975
Dod07g0117 295 Pfam Glycosyl hydrolases family 16 41 222 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0117 Dod-Chr7 1421177 1423814 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0117 1 293 Glycoside Hydrolase AT3G44990 65.188 8.02e-144 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0117 K08235 - gmx:100796698 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0117 07 1421177 1423814 Dod07g0117 07 1421177 1423814 ECH
Dod01g2762 01 67444122 67446806 Dod07g0117 07 1421177 1423814 PCT