Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2858 ATGTGGAGGCTGAAGATAGGAGAAGGAGGGAAGGATCCGTACATATTCAGCACAAACAACTTCGTGGGGAGGCAGACATGGGAGTATGATCCGGAGGCAGGCAGCCCCGAGGAGCGAGCAGAGGTTGAGGCAGCTCGTCAGCACTTCTATGACAACCGCTTCAAGGTCAAGCCCTGCGGCGACCTCCTTTGGCGCTTTCAGATTTTGAGAGAAAAGAATTTTAAACAAACTATACCAAGTGTGAAGATTGAAGATGGTGAGGAGATCACATTCCACAAAGCTACAGCCGCGTTGAGAAGGGCCGCACATCACCTATCAGCATTGCAGACCAGTGATGGCCATTGGCCTGCTCAAATTGCCGGTCCCCTCTTTTTCCTTCCTCCATTGGTCTTTTGTGTGTATATTACAGGGCACCTTGATTCCGTATTCCGAGAAGAGTACCGCAAAGAGATTCTTCGCTACATATACTATCACCAGAACGAAGATGGAGGGTGGGGACTACACATTGAGGGTCACAGCACCATGTTCTGTACTGCACTCAACTACATATGCATGCGAATTCTTGGAGAAGAGCCTGATGGAGGTCAAGATGATGCCTGTGCTAGAGCAGGGAAGTGGATTCATGATCATGGTGGTGTAACACATATACCCTCATGGGGAAAAACTTGGCTTTCGATACTAGGTGTGTTTGAATGGTGCGGAAGCAACCCAATGCCCCCTGAGTTTTGGCTCCTTCCTTCGTTTCTCCCTATGCATCCAGCTAAAATGTGGTGTTATTGTCGGTTGGTATACATGCCTATGTCATACTTATATGGGAAGAGGTTTGTCGGTCCAGTCACACCACTCATACTGCAATTGAGAGAAGAACTCTACACTCAACCTTATGAAAAAGTTAATTGGAAGAAAGCGCGTCACCAATGTGCAAAGGAAGATCTTTACTATCCCCATCCTTTGATACAAGATCTAATATGGGATAGTTTATACATATTCACTGAGCCACTTCTTACACGTTGGCCCTTCAACAAGCTGGTCAGAGAAAAGGCTCTTCAAGTAACAATGAAGCATATACATTACGAAGATGAGAATAGTCGATACATGACCATTGGCTGCGTGGAGAAGGTGGGTATCGTAATTCGTAACAATAAAAGCACCTCCCTTATTTGGCCGCACGCATCATCAAGTGAAGCGAAATTTACATTTTGGCTTTCCTCTGCGGAAGAGGATGGTGTATTAACATGTATGTATGGATGTATCTGCCAGGTTTTATGTATGCTTGCTTGTTGGGCGGAAGATCCAAACGGAGATGCTTTCAAGAAACATCTTGCGAGGGTCCCTGATTACTTGTGGGTTTCAGAAGATGGAATGACCATGCAGAGTTTTGGTAGCCAGGAATGGGATGCTGGCTTTGCCGTTCAAGCATTGCTTGCCACTAACCTTGCTGATGAAATTGGTCCCACGCTTGCTAAAGGACATGACTTCATAAAAAAATCTCAGGTCAGGGACAACCCTTCAGGAGATTTTAGGAGTATGTATCGTCATATTTCTAAAGGATCGTGGACCTTCTCTGATCAAGACCATGGATGGCAAGTTTCTGATTGTACCGCAGAAGGTTTGAAGTGTTGTCTGCTTTTATCAACGTTGCCACCGGAGATTGTGGGGGAGAAGATGGAACCTGAAAGATTATATGATTCAGTCAATCTCCTATTGTCGCTTCAGAGTAAAAAGGGTGGTTTACCAGCATGGGAGCCAGCTGGTGCTCAAGAATGGTTGGAACTACTGAATCCAACGGAGTTTTTCGCGGACATCGTAGTTGAGCACGAATATGTGGAGTGCACTGGATCGGCAATTCAGGCTCTAGTTTTGTTCAAGAAGCTGTATCCAGGGCATAGGAAGAAAGAGATAGAGAACTTCATTGCGAACGCAGTTCGGTTTCTGGAAGAGACGCAGACAGGTGATGGGTCATGGTATGGGAACTGGGGAGTGTGCTTCACTTATGGCTCCTGGTTCGCCCTTGGTGGCCTCGCCGCTGCTGGCAAGACCTACTCCAACTCTCCTGCCATCCGCAAAGCCGTCAAATTTCTACTCTCTACGCAGAGGGACGATGGTGGCTGGGGGGAGAGTTATCTTTCAAGCCCCAAAAAGATATATGTGCCTCTTGAAGGAAGCCGATCAAATGTTGTACATACAGCATGGGCTCTCATGGGTCTACTTCATGCTGGCCAGGCTGAGAGAGACCCAACTCCTCTTCACCGTGCAGCAAAGTTGATAATCAACTCTCAATTGGAAGAGGGCAATTGGCCCCAACAGGAAATTACCGGAGTATTTATGAAAAATTGTATGCTGCATTACCCAATGTATAGAGATATTTATCCGATGTGGGCTCTGGCTGAATATCGCAGACGGGTTCCATTGCCTTCCGGTCAAGTTTAG 2430 0.4663 MWRLKIGEGGKDPYIFSTNNFVGRQTWEYDPEAGSPEERAEVEAARQHFYDNRFKVKPCGDLLWRFQILREKNFKQTIPSVKIEDGEEITFHKATAALRRAAHHLSALQTSDGHWPAQIAGPLFFLPPLVFCVYITGHLDSVFREEYRKEILRYIYYHQNEDGGWGLHIEGHSTMFCTALNYICMRILGEEPDGGQDDACARAGKWIHDHGGVTHIPSWGKTWLSILGVFEWCGSNPMPPEFWLLPSFLPMHPAKMWCYCRLVYMPMSYLYGKRFVGPVTPLILQLREELYTQPYEKVNWKKARHQCAKEDLYYPHPLIQDLIWDSLYIFTEPLLTRWPFNKLVREKALQVTMKHIHYEDENSRYMTIGCVEKVGIVIRNNKSTSLIWPHASSSEAKFTFWLSSAEEDGVLTCMYGCICQVLCMLACWAEDPNGDAFKKHLARVPDYLWVSEDGMTMQSFGSQEWDAGFAVQALLATNLADEIGPTLAKGHDFIKKSQVRDNPSGDFRSMYRHISKGSWTFSDQDHGWQVSDCTAEGLKCCLLLSTLPPEIVGEKMEPERLYDSVNLLLSLQSKKGGLPAWEPAGAQEWLELLNPTEFFADIVVEHEYVECTGSAIQALVLFKKLYPGHRKKEIENFIANAVRFLEETQTGDGSWYGNWGVCFTYGSWFALGGLAAAGKTYSNSPAIRKAVKFLLSTQRDDGGWGESYLSSPKKIYVPLEGSRSNVVHTAWALMGLLHAGQAERDPTPLHRAAKLIINSQLEEGNWPQQEITGVFMKNCMLHYPMYRDIYPMWALAEYRRRVPLPSGQV* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2858 809 ProSitePatterns Terpene synthases signature. 652 666 IPR002365 GO:0016866
Dod06g2858 809 PANTHER LUPEOL SYNTHASE 1 415 803 - -
Dod06g2858 809 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 121 374 IPR008930 -
Dod06g2858 809 CDD SQCY_1 98 798 IPR018333 GO:0005811|GO:0016104|GO:0016866
Dod06g2858 809 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 414 803 IPR008930 -
Dod06g2858 809 PANTHER TERPENE CYCLASE/MUTASE FAMILY MEMBER 1 374 IPR018333 GO:0005811|GO:0016104|GO:0016866
Dod06g2858 809 PANTHER LUPEOL SYNTHASE 1 1 374 - -
Dod06g2858 809 Pfam Squalene-hopene cyclase C-terminal domain 465 800 IPR032696 -
Dod06g2858 809 SFLD Prenyltransferase Like 2 388 801 IPR018333 GO:0005811|GO:0016104|GO:0016866
Dod06g2858 809 TIGRFAM squalene_cyclas: squalene/oxidosqualene cyclases 406 800 IPR018333 GO:0005811|GO:0016104|GO:0016866
Dod06g2858 809 Gene3D - 435 806 - -
Dod06g2858 809 PANTHER TERPENE CYCLASE/MUTASE FAMILY MEMBER 415 803 IPR018333 GO:0005811|GO:0016104|GO:0016866
Dod06g2858 809 Gene3D - 119 395 - -
Dod06g2858 809 Pfam Squalene-hopene cyclase N-terminal domain 99 368 IPR032697 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2858 Dod-Chr6 59854823 59871816 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2858 K15813 - ag:BAA89815 1501.11