Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2851 ATGTGGAGTCTGGCAGTGACTCTGAGAAGCAGTGGTTTGTGTTGTTGGCATCAAATACATTGCTCCTCCTCCTCGGATTCGAGGAGCCCAACAAGGCGTGGCTTTGGTGTTGGAGATAACGCTACCACTAACAGGAGCAACAAAAACAAAGGCGAAGCAGCGAAGGACAGGGTATCAACGCCTAAACTGTGTGGCTCTGGCAATTCTCTATCATCCTCTCAGGCACCTCGTTTAAGTTCACAACTTGATGGCAACAAGTCTAGGAACAATAATTTGGATCTTGACTTTGAGGAACGACTAAAAGCAGTTAGAAGGTCGGCACTTGAGCAAAAGAGAGCAGAGGAGGAAAAAGAATTTGGAGCTATTGACTACGATGCACCAGTGTCTTCCGACCAAAAGACAATTGGCACTGGTACCAAGATTGGAGTAGGTGTAGCTGTTGTGGTCTTCGGTCTGGTTTTTGCTTTTGGAGATTTTCTTCCATCTGGAAGCATCACTCCCAACGAAGACAGCGCTGTGGTCAGTAGTAAATTGTCAGAAAAAGAGAAAGCTAGTCTTCAGAGTAGACTTGAGGAATTTGAATCGACATTAAGGAACTCCCCTAGAGATCCAACCGCTCTTGAAGGAGCTGCAGTGACTTTGGCAGAACTAGGGGAATATGCAAGAGCAGCCTCTGTACTTGATGATTTGACAAAGGAAAAACCAAATGATCCTGACATTTTCCGTTTGCTTGGAGAAGTTAAGTATGAACTCAAAGATTATGAAGGGAGTATTGCTGCATATAAAAATTCAGCAACGGTGTCTAAGGATATCAAATTTGAAGTTTTGCGTGGCCTTACCAATTCATTACTTGCTGCTGAAAAGCCAGATGAGGCTGTTCAATTTCTTCTGGCTTGTCGTGAGCACCTGAGTTCAGAATACGAAAGCAAAAAGTCTGATAGCAGCCCAACAGAATCAGAGGAGCTGGATCCAGTCCAAGTTGAATTACTTCTTGGAAAAGCCTACTCAGATTGGGGACATGTCAGTGATGCTATAGCTGTTTATGACCAGCTCATATCAACTCATCCTGATGATTTCCGTGGATACTTAGCTAAGGGAATCATCCTAAAAGAAAACAAAAACATTGGAGATGCAGAGAGGATGTTCATACAAGCTCGGTTCTTTGCACCAGATAAAGCTAAAGCACTTGTGGACCGTTACTCAAGATGA 1209 0.4376 MWSLAVTLRSSGLCCWHQIHCSSSSDSRSPTRRGFGVGDNATTNRSNKNKGEAAKDRVSTPKLCGSGNSLSSSQAPRLSSQLDGNKSRNNNLDLDFEERLKAVRRSALEQKRAEEEKEFGAIDYDAPVSSDQKTIGTGTKIGVGVAVVVFGLVFAFGDFLPSGSITPNEDSAVVSSKLSEKEKASLQSRLEEFESTLRNSPRDPTALEGAAVTLAELGEYARAASVLDDLTKEKPNDPDIFRLLGEVKYELKDYEGSIAAYKNSATVSKDIKFEVLRGLTNSLLAAEKPDEAVQFLLACREHLSSEYESKKSDSSPTESEELDPVQVELLLGKAYSDWGHVSDAIAVYDQLISTHPDDFRGYLAKGIILKENKNIGDAERMFIQARFFAPDKAKALVDRYSR* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2851 402 MobiDBLite consensus disorder prediction 22 48 - -
Dod06g2851 402 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 18 402 - -
Dod06g2851 402 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 18 402 - -
Dod06g2851 402 MobiDBLite consensus disorder prediction 22 91 - -
Dod06g2851 402 SUPERFAMILY TPR-like 205 395 IPR011990 GO:0005515
Dod06g2851 402 Coils Coil 176 196 - -
Dod06g2851 402 ProSiteProfiles TPR repeat profile. 325 358 IPR019734 GO:0005515
Dod06g2851 402 MobiDBLite consensus disorder prediction 62 89 - -
Dod06g2851 402 Gene3D Tetratricopeptide repeat domain 166 400 IPR011990 GO:0005515
Dod06g2851 402 Coils Coil 97 117 - -
Dod06g2851 402 Pfam Tetratricopeptide repeat 191 245 - -
Dod06g2851 402 SMART tpr_5 238 271 IPR019734 GO:0005515
Dod06g2851 402 SMART tpr_5 273 306 IPR019734 GO:0005515
Dod06g2851 402 SMART tpr_5 204 237 IPR019734 GO:0005515
Dod06g2851 402 SMART tpr_5 359 392 IPR019734 GO:0005515
Dod06g2851 402 SMART tpr_5 325 358 IPR019734 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2851 - - gmx:100790462 526.554