Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2820 ATGACCCAAGAAGGCTTCTTGGCCACACTCCTCAACGGCGACGCCCGCGACCCCCACTCCCCGGCCCAGCCCTTCACCTCCGAAGACGGCGTCCCCAACGCCCGCGGCCGCGTCCTCGGCGGCAGCAGCGCCATCAACGCCGGCTTCTACAGCCGCGCCGACCCCGAATTCTTCTCCCGCTCGGGCCTGCACTGGGACCTCAAGCTCGCCAACGAGTCCTACGAATGGGTCGAGCGCGAGATCGTCTTCCGACCGCACCTCCGCACCTGGCAGTCCGCCGTCCGCGACGGCTTGCTGGAGGCCGGGGTCTCACCCTACAACGGCTTCACGCTGGACCACGCTAAGGGAACCAAGATCGGAGGCTCCACATTCGACACCACCGGAGCCCGCCACAGCTCGGCGGATCTTCTCCGCTACGCCAAAGCCTCCAACATCAAGGTCGCGCTCTACGCGAGCGTGGAGCGCGTGCTCCTCGCGTCCTCTGCTCCAACTTCTACTTCTAGGGTTTCTGCCATTGGTGTCCTCTTTCGTGACCTGATGGGGAGGTACCACCATGCAATGGTGCGTGAGCGCGGTGAGGTGATTCTCTCCGCCGGCTCGATTGGGAGCCCGCAGCTTCTGCTTCTGAGTGGGATTGGGCCCAGGCCCTATTTGTCTTCGTGGGGGATTCCCGTGGCCCATCATCTTCCTTACGTGGGCCATTTCCTTTATGATAACCCCAGGAATGGGATTACGATTGTGCCCTCGGTTCCGCTTGAGCATTCGCTGATACAGGTTGTGGGGATCACGGATTCTGGTGCGTATGTTGAGGCTGCGTCTAATGTCATCCCCTTTGCGTCCCCCGCTCACAGCGTGTTCATACGCGCGCCTTCTTCGCCGATTTACCTCACCGCAGGCTACCCTCATTGCCAAGATCTCTGGCCCACTCTCAAGCGGCTTTCTAAGGCTGAGTTCAACCGATGTGAGGCTCAACCCAGTGGTGAGGTTCAACTACTTGAACAACCCGATAGATGTGGAGAGGTGCGTGAACGGGACGAGGAAGATAGGGGAGGTGCTGAGGAGCAGGGCGCTGAACGACTTCAAGTTCAGGAACTGGCTGGGAGGCCAGGACTTCAGGTTCGTGGGCCCCGCCCTCCCCCCTGA 1143 0.6142 MTQEGFLATLLNGDARDPHSPAQPFTSEDGVPNARGRVLGGSSAINAGFYSRADPEFFSRSGLHWDLKLANESYEWVEREIVFRPHLRTWQSAVRDGLLEAGVSPYNGFTLDHAKGTKIGGSTFDTTGARHSSADLLRYAKASNIKVALYASVERVLLASSAPTSTSRVSAIGVLFRDLMGRYHHAMVRERGEVILSAGSIGSPQLLLLSGIGPRPYLSSWGIPVAHHLPYVGHFLYDNPRNGITIVPSVPLEHSLIQVVGITDSGAYVEAASNVIPFASPAHSVFIRAPSSPIYLTAGYPHCQDLWPTLKRLSKAEFNRCEAQPSGEVQLLEQPDRCGEVRERDEEDRGGAEEQGAERLQVQELAGRPGLQVRGPRPPP* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2820 380 ProSitePatterns GMC oxidoreductases signature 2. 199 213 IPR000172 GO:0016614|GO:0050660
Dod06g2820 380 ProSitePatterns GMC oxidoreductases signature 1. 36 59 IPR000172 GO:0016614|GO:0050660
Dod06g2820 380 MobiDBLite consensus disorder prediction 333 380 - -
Dod06g2820 380 PANTHER (R)-MANDELONITRILE LYASE-LIKE 1 297 - -
Dod06g2820 380 Pfam GMC oxidoreductase 22 239 IPR000172 GO:0016614|GO:0050660
Dod06g2820 380 MobiDBLite consensus disorder prediction 335 355 - -
Dod06g2820 380 SUPERFAMILY FAD/NAD(P)-binding domain 15 261 IPR036188 -
Dod06g2820 380 MobiDBLite consensus disorder prediction 11 32 - -
Dod06g2820 380 Gene3D - 1 278 IPR036188 -
Dod06g2820 380 PANTHER OSJNBA0019K04.7 PROTEIN 1 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2820 Dod-Chr6 59566867 59568733 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2820 4 276 Miscellaneous Gene Families AT5G51950 50.725 2.87e-77 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2820 K08248 - qsu:112001779 477.248