Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2753 ATGAGTCTTATTTCTAACCTTTTTGGGAAAAAGATCAAAGGCACAGTTGTGTTGATGTCAAAGAATGTTCTAGACATCAACAGCTTGCTTAGTGCTGAGGGGATTATCAGTGGTGTTGTGGGTGGAGCTACCTCAGTACTTGACACCCTTTCTTCCATCTTAAACAGATCAGTCTCCCTACAATTGATTAGTGCTGACAAAACTGATTCAAGTGGAAAAGGAAAAGTCGGAGATAAGACTTATTTAGAAGGAGCTATCAATAATTTGCCAACCTTGGGTGACAAACAAAGCGCATTCAGCATTCACTTTGATTATGATGCTAATTTCGGAGTTCCTGGAGCATTTTATATCAAGAACTTTATGGACAATGAGTTCTTCCTTGTTAGTGTGACTCTTGAAGACATTCCAAACCAGGGAAGCATCCACTTTGTATGCAACTCATGGATTTACAATGCAAAAAAATATGACAGTGATCGCATTTTCTTCGCCAACAATACTTATCTACCAAGTAAAACACCAGCTGCACTAGTGTACTACAGAGAACAAGAGTTGAAGAATTTAAGAGGAACTGGAACAGGGGAGCGCAAGGAATGGGAAAGGGTATATGATTATGATACTTACAATGATTTGGGTGAACCAGATAAGGGTGATGAGAATTCTCGTCCAATTTTGGGAGGATCTACCACCTATCCTTATCCTCGCAGGGGAAGAACTGGCAGAGCAGCATCAAAAACAGATCCCAGCCGTGAGAGTAGGAGCAGCAGTATCTATATTCCCAGAGATGAAGCTTTTGGTCACTTGAAATCCTCAGATTTCCTTGTATATGCACTGAAGTCTGTATCCCAAGATGTGATCCCAGCATTACAATCTGTGTTTGACATACATTTCACCCCAAATGAGTTTGATAGCTTTGATGATGTGCGTAGTCTGTATGAAGGAGGAATTAAGCTGCCTACAGATTTATTTAGTAAAATCAGTCCTTTGCCAATGCTCAAGGAACTCTTCAGAACCGATGGTGAAGAGTTCCTCAAGTTCCCACCGCCTAAAGTAATTCAAGTGAGTAAATCTGCGTGGATGACTGATGAAGAATTTGCTAGGGAGATTGTTGCTGGTGTCAATCCTGGCTTGATTTCCAGTCTTCAAGAGTTTCCTCCAAAAAGTAAACTAGACAGCGCAGTCTATGGAGACCAAACTAGTGCAATAACCAAAGAACAACTAGAGCTGAACTTGGATGGGATCACTGTAGATCAGGCTATCCAGAACAAGAAATTGTTCCTGCTAGATCACCATGATGTAGTAATTCCCTATCTGAGGAGAATTAACTCAACTTCTACAAAGACTTATGCTTCCAGGACCATCTTTTTCTTGACAAATGATGGAACTTTAAAGCCATTAGCTATTGAGTTGAGTTTGCCAAGTTCTCAGGGAGACCAACACGGTGTTGTTAGTAAGGTCTACTTGCCTGCAACTGTAGGAGTTGAAAGTACTATTTGGCTACTGGCCAAGGCTTATGTTATTGTAAATGACTCATGCTATCACCAACTTGTTAGTCACTGGTTGAATACTCATGCAGTTGTTGAACCATTCGTCATAGCAACAAACAGACAACTTAGTGTGATTCATCCTATTCATAGACTTTTATATCCTCACTATCGTGATACCATGAATATAAATGCACTTGCTAGGGGAAGCCTAGTCAATTCAGGTGGTATTATAGAAAAAACTTTCTTGTGGGGAGGTTATGCCATGGAAATGTCTTCCAAAGTTTACAAGGATTGGGTTTTTCCAGACCAAGCACTACCTGCTGATCTTATCAAGAGGGGAATAGCAGTGGAAGATGCATCTGCCCCTCATGGTCTCCGCCTTCTAATAGAGGACTACCCTTATGCTGTTGATGGACTAGACATTTGGGATGCTATTAAGACATGGGTCCAAGAATATGTCTCCATATACTACCCATCAGATGACATAATTCAACAAGACGCTGAACTCCAATCTTGGTGGAACGAAATTGTGAATGTGGGTCATGGTGACAAAAAAGATGAGTCTTGGTGGCCTAAAATGCAAACTAGTGAAGAGCTCATAGAAGCCTGCAGTACTATCATATGGATTGCATCAGCCCTTCATGCAGCTGTTAATTTTGGACAATATCCTTATGGGGGTTTCATCTTAAACCGCCCAACTCTTAGTAGGCGGTTAATGCCTGAGGAAGGAACTGATGAGTATGATGAGCTTTCTACAGACCCTCAGAAGGCTTACCTGAAAACAATCACACCAAAGTTTCAAACTCTCATTGACCTTTCAGTTATAGAAGTCTTGTCAAGGCATACCTCTGATGAGTACTACCTTGGACAAAGAGCAGATGGTGAATACTGGACTTCTGATACAAATGCAGTAGCGGCCTTCAAGAGGTTTGGAAAAAACCTGGCAGATATTGAGCAGCAACTCATTCAGAGGAACAACAATGAAACATTGAGAAACAGGGTTGGGCCAGTTAGCATGCCTTACACTTTGCTTTATCCTTCAAGCGATGAGGGACTGACTTTTAGAGGAATCCCTAACAGTATATCAATCTAA 2577 0.4117 MSLISNLFGKKIKGTVVLMSKNVLDINSLLSAEGIISGVVGGATSVLDTLSSILNRSVSLQLISADKTDSSGKGKVGDKTYLEGAINNLPTLGDKQSAFSIHFDYDANFGVPGAFYIKNFMDNEFFLVSVTLEDIPNQGSIHFVCNSWIYNAKKYDSDRIFFANNTYLPSKTPAALVYYREQELKNLRGTGTGERKEWERVYDYDTYNDLGEPDKGDENSRPILGGSTTYPYPRRGRTGRAASKTDPSRESRSSSIYIPRDEAFGHLKSSDFLVYALKSVSQDVIPALQSVFDIHFTPNEFDSFDDVRSLYEGGIKLPTDLFSKISPLPMLKELFRTDGEEFLKFPPPKVIQVSKSAWMTDEEFAREIVAGVNPGLISSLQEFPPKSKLDSAVYGDQTSAITKEQLELNLDGITVDQAIQNKKLFLLDHHDVVIPYLRRINSTSTKTYASRTIFFLTNDGTLKPLAIELSLPSSQGDQHGVVSKVYLPATVGVESTIWLLAKAYVIVNDSCYHQLVSHWLNTHAVVEPFVIATNRQLSVIHPIHRLLYPHYRDTMNINALARGSLVNSGGIIEKTFLWGGYAMEMSSKVYKDWVFPDQALPADLIKRGIAVEDASAPHGLRLLIEDYPYAVDGLDIWDAIKTWVQEYVSIYYPSDDIIQQDAELQSWWNEIVNVGHGDKKDESWWPKMQTSEELIEACSTIIWIASALHAAVNFGQYPYGGFILNRPTLSRRLMPEEGTDEYDELSTDPQKAYLKTITPKFQTLIDLSVIEVLSRHTSDEYYLGQRADGEYWTSDTNAVAAFKRFGKNLADIEQQLIQRNNNETLRNRVGPVSMPYTLLYPSSDEGLTFRGIPNSISI* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2753 858 CDD PLAT_LH2 10 164 IPR042057 -
Dod06g2753 858 SUPERFAMILY Lipoxigenase 168 858 IPR036226 -
Dod06g2753 858 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 166 858 IPR013819 GO:0016702|GO:0046872
Dod06g2753 858 Gene3D - 357 490 - -
Dod06g2753 858 PRINTS Lipoxygenase signature 495 512 IPR013819 GO:0016702|GO:0046872
Dod06g2753 858 PRINTS Lipoxygenase signature 533 553 IPR013819 GO:0016702|GO:0046872
Dod06g2753 858 PRINTS Lipoxygenase signature 513 530 IPR013819 GO:0016702|GO:0046872
Dod06g2753 858 Gene3D - 491 857 - -
Dod06g2753 858 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE-3 9 858 - -
Dod06g2753 858 MobiDBLite consensus disorder prediction 209 254 - -
Dod06g2753 858 Pfam Lipoxygenase 176 841 IPR013819 GO:0016702|GO:0046872
Dod06g2753 858 PRINTS Plant lipoxygenase signature 343 359 IPR001246 GO:0016491
Dod06g2753 858 PRINTS Plant lipoxygenase signature 159 180 IPR001246 GO:0016491
Dod06g2753 858 PRINTS Plant lipoxygenase signature 231 250 IPR001246 GO:0016491
Dod06g2753 858 PRINTS Plant lipoxygenase signature 770 784 IPR001246 GO:0016491
Dod06g2753 858 PRINTS Plant lipoxygenase signature 133 151 IPR001246 GO:0016491
Dod06g2753 858 PRINTS Plant lipoxygenase signature 448 472 IPR001246 GO:0016491
Dod06g2753 858 PRINTS Plant lipoxygenase signature 382 401 IPR001246 GO:0016491
Dod06g2753 858 PRINTS Plant lipoxygenase signature 298 319 IPR001246 GO:0016491
Dod06g2753 858 PRINTS Plant lipoxygenase signature 198 214 IPR001246 GO:0016491
Dod06g2753 858 ProSitePatterns Lipoxygenases iron-binding region signature 1. 513 527 IPR020833 GO:0016702|GO:0046872
Dod06g2753 858 Gene3D - 168 267 - -
Dod06g2753 858 PANTHER LIPOXYGENASE 9 858 IPR000907 GO:0016702|GO:0046872
Dod06g2753 858 ProSitePatterns Lipoxygenases iron-binding region signature 2. 540 550 IPR020834 GO:0016702|GO:0046872
Dod06g2753 858 Gene3D - 268 356 IPR027433 -
Dod06g2753 858 Pfam PLAT/LH2 domain 69 162 IPR001024 GO:0005515
Dod06g2753 858 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 10 167 IPR036392 GO:0005515
Dod06g2753 858 ProSiteProfiles PLAT domain profile. 32 163 IPR001024 GO:0005515
Dod06g2753 858 Gene3D PLAT/LH2 domain 5 167 - -
Dod06g2753 858 SMART LH2_4 10 164 IPR001024 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2753 Dod-Chr6 58676904 58683598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2753 10 858 Acyl Lipid Metabolism Gene Families AT1G55020 59.117 0.0 1053
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2753 K15718 - gmx:547869 1330.47