Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2733 ATGATTGAGTGCTTAAGCCAGTGCGTTTCATTTGAGTGCTGTGAAGCTGTAATGCCGAAATCCAATTTTCCGGAGTCTGGTCCTGTCTTGAAGAAGTTGAAAAGAACAACCATTTTGGCTTCTGAAAACGTAGATAATTGTGAAGTGGCCGAAAGTCAGGACAGACTTGGTGACTTACCGGATTGCCTCCTGCATCATATTTTGTCATTTGTGGAGACAAAGGATGCAATTCAGACTTGTGTTTTATCGAAAAGGTGGAGGTATCTTTGGGCTTCAGTTCCCTGCCTGAACTTCAGCAGCAAATCATTCAATCGGTTGGTTGATTTCAGGAAGTTTGTACTTTGGGTTCTATCCCATCGCGATTCTTCCCAGGTTAAGGTTCTTATTTACTATCGCTTTGGGGTGGATTATGCGACTGATCAATATCTATTGAATAAGGTTATTGAATATGCAGCATCACATGGTGTTGAAGAAGTCAGAATCAATCTTCGGGCTAAAACATCTGGCAGTCCGCCTGTTGAAATCCCTTGGTCTCTGTTTAGGTGCCAATCCTTGAGAAAACTTGAGTTAAAAGATTGTCATCCTACAAATGTCTCATCCCCTTTCAGTTTCAAACCATTGGAATTGGATACATTGCATTTGGAACATTTCTCAATGTACCCTTCTGCTGCTGATTTTTCAAATCCATTTGCAAGTTTGGCAGAACTTTTTGGTTTTACAACATTGACAACTTTGCATCTAAACAGCTTCACCCTGTGTTATACGGGAATTGACTGTCTGAATCCATTTGCTAATTGTGTCAATTTGAAAAATTTGCACTTAAGTGAAATGTCCTTTAAGTCAGATTTGAACCCGAAGGATTTTGTCATATCTGCTCCGCAACTTAAAAACTTAAGCCTAATGTGCAACCGCTTTAAATGTAAGATTGTAGTTGCTGCACCACAACTTACCAACTTCAGTTACTTGTATTCTACACCTTGTGCCTTCTTTGAGTTTAGTCTTCCTTCTTTGGATGGCTTGATAATTGATATTCACGAACCACATGATCAATTGGAAAAATCACATCGGAAGAAGAGAGAAGAGACTTTACATGGTTTGATCAATATGATTCGGGGACATCATAAATCTGAAGCAGTTAAACTATCGTTCTGTACAGTTGCGGTTACCTGTGGTACTGCAGTCTTGTTAAAGCCAGAGTGTTTCTCTTTTAGTAAATTGAAGTCATTAAACTTTGGGGTCGGAACGACATATAAAATATTCATTAACAACCTTGACCATATAACTGCCTACTTCCGCAATTGCTCTCAGCATGCAGACTTCGAGATTGTACCTATTTAG 1338 0.3931 MIECLSQCVSFECCEAVMPKSNFPESGPVLKKLKRTTILASENVDNCEVAESQDRLGDLPDCLLHHILSFVETKDAIQTCVLSKRWRYLWASVPCLNFSSKSFNRLVDFRKFVLWVLSHRDSSQVKVLIYYRFGVDYATDQYLLNKVIEYAASHGVEEVRINLRAKTSGSPPVEIPWSLFRCQSLRKLELKDCHPTNVSSPFSFKPLELDTLHLEHFSMYPSAADFSNPFASLAELFGFTTLTTLHLNSFTLCYTGIDCLNPFANCVNLKNLHLSEMSFKSDLNPKDFVISAPQLKNLSLMCNRFKCKIVVAAPQLTNFSYLYSTPCAFFEFSLPSLDGLIIDIHEPHDQLEKSHRKKREETLHGLINMIRGHHKSEAVKLSFCTVAVTCGTAVLLKPECFSFSKLKSLNFGVGTTYKIFINNLDHITAYFRNCSQHADFEIVPI* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2733 445 SUPERFAMILY L domain-like 173 331 - -
Dod06g2733 445 Pfam F-box domain 58 93 IPR001810 GO:0005515
Dod06g2733 445 PANTHER CYCLIN-LIKE F-BOX 40 445 - -
Dod06g2733 445 SMART fbox_2 59 99 IPR001810 GO:0005515
Dod06g2733 445 Gene3D Ribonuclease Inhibitor 147 330 IPR032675 -
Dod06g2733 445 ProSiteProfiles F-box domain profile. 53 106 IPR001810 GO:0005515
Dod06g2733 445 Gene3D - 41 96 - -
Dod06g2733 445 SUPERFAMILY F-box domain 52 109 IPR036047 GO:0005515
Dod06g2733 445 PANTHER F-BOX PROTEIN-LIKE 40 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2733 Dod-Chr6 58412020 58419502 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2733 49 222 EF-hand Containing Proteins AT5G41840 30.052 7.35e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2733 - - vun:114167379 742.265