Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2726 ATGAATGCATTGTTGAAAATATTGGAGCTGGCAGTATTGAAAAAAAGACCACTCCTGGTTGTTGCGGAAGATGTTGAGAGTGATGCATTGGCTATGCTCATACTCAACAAGCATCATGCAGGGCTTAAGGTTTGTGCTGTAAAAGCTCCTGGTTTTGGGGATAGTAGAAGAGCAAATCTAGATGATCTTGCAATTCTTACTGGAGGAGAGGTCATTACAGAAGATCGTGGTTTTACTCTTGACAAAGTACTGCCAGAAATGCTTGGCACTGCAAGAAGGGTTACTGTTTCCATTGATGACACTATTGTTCTACACGGAGGTGGGGATAAGAAACTCATTGAAGAGAGATGTGAAGAGCTCAGGACAGCCATGGAGAAGAGTTCTTCTACATTTGATAAAGAAAAAGCACAGGAACGCCTATCAAAGCTATCTGGTGGTGTAGCTGTTTTCAAGGTTGGAGGAGCCAGTGAGGCAGAAGTTTTGGAACGGAAAGATAGGGTAACGGATGCTTTAAACGCCACCAGAGCAGCCGTGGAGGAGGGAATTGTTCCAGGGGGTGGAGTTGCTCTCTTATACGCCACCAAAGTTTTGGAGAACCTCCAAACTCAAAATGAAGATGAGAAAAGAGGAGTACAGATTATTCAGAATGCACTTAAGGCTCCTACTTTCACAATAGCTTCAAATGCTGGTTTTGATGGCGCTTTGGTTCAGAGCAAATTATTGGAACAAGACAATCATAATTTGGGATTTGATGCTGCAGAAGGTGCCTATGTTGATATGGTAAAGGCTGGGATTGTAGACCCTCTTAAAGTTGTTAGAACAGCTTTGGTAGATGCTGCCAGTGTCTCATTGCTACTGACAACAACCGAGGCAGCTGTGGTGGAAAGTCCCAATAACAAAAATAAACCTCCTAGCCGAGTGCCCGACATGGACGATTTGGACCTCTAA 948 0.4378 MNALLKILELAVLKKRPLLVVAEDVESDALAMLILNKHHAGLKVCAVKAPGFGDSRRANLDDLAILTGGEVITEDRGFTLDKVLPEMLGTARRVTVSIDDTIVLHGGGDKKLIEERCEELRTAMEKSSSTFDKEKAQERLSKLSGGVAVFKVGGASEAEVLERKDRVTDALNATRAAVEEGIVPGGGVALLYATKVLENLQTQNEDEKRGVQIIQNALKAPTFTIASNAGFDGALVQSKLLEQDNHNLGFDAAEGAYVDMVKAGIVDPLKVVRTALVDAASVSLLLTTTEAAVVESPNNKNKPPSRVPDMDDLDL* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2726 315 PANTHER CHAPERONIN CPN60-2, MITOCHONDRIAL 1 307 - -
Dod06g2726 315 ProSitePatterns Chaperonins cpn60 signature. 176 187 IPR018370 GO:0005524|GO:0006457
Dod06g2726 315 PANTHER 60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 307 - -
Dod06g2726 315 SUPERFAMILY GroEL equatorial domain-like 166 297 IPR027413 -
Dod06g2726 315 Gene3D GroEL 1 146 IPR027409 -
Dod06g2726 315 Coils Coil 197 217 - -
Dod06g2726 315 PRINTS 60kDa chaperonin signature 121 146 IPR001844 GO:0042026|GO:0140662
Dod06g2726 315 PRINTS 60kDa chaperonin signature 39 62 IPR001844 GO:0042026|GO:0140662
Dod06g2726 315 PRINTS 60kDa chaperonin signature 169 190 IPR001844 GO:0042026|GO:0140662
Dod06g2726 315 SUPERFAMILY GroEL apical domain-like 2 147 IPR027409 -
Dod06g2726 315 Gene3D - 147 181 IPR027410 -
Dod06g2726 315 MobiDBLite consensus disorder prediction 294 315 - -
Dod06g2726 315 Gene3D - 182 290 IPR027413 -
Dod06g2726 315 Pfam TCP-1/cpn60 chaperonin family 3 295 IPR002423 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2726 Dod-Chr6 58348822 58352730 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2726 K04077 - gmx:100778935 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2726 06 58348822 58352730 Dod06g2726 06 58348822 58352730 ECH