Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2717 ATGGGCCTCAACAAGCTCATAGTTTGGAATGTGCTATTGGCATGTTCATTGATTGGTCATGCTTCAGCTTCTGTTTCTTATGACCATAAGGCTATCGCCATTAATGGACAAAGGAGGATACTGCTTTCTGGGTCCATTCATTACCCCAGAAGCACCCCTGAGATGTGGCCAGATCTTATACAGAAGGCAAAGGAAGGAGGCTTGGATGTGATTCAGACTTATGTTTTCTGGAATGGACATGAACCTTCACCTGGCAAATATTATTTTGGGGGGAACTATGATCTGGTGAAGTTCATAAAGCTGGTGCAGCAAGCAGGCCTTTATGTTCACCTGAGGATTGGTCCTTATGTATGTGCTGAGTGGAACTTCGGTGGATTCCCTGTTTGGCTCAAGTACATACCGGGCATTCACTTCAGAACAGACAATGGACCATTTAAGTTTCAAATGCAAAAATTTACAAAGAAGATTGTGGATATGATGAAAGCCGAAAGGCTATATGAGTCTCAAGGTGGTCCAATCATTCTATCACAGATTGAAAATGAATATGGACCTATGGAGTATGAAATTGGTGCTCCTGGCAAAGCTTACACTCAGTGGGCAGCACATATGGCTGTAGGGCTTGGTACCGGGGTTCCATGGGTCATGTGCAAGCAAGATGATGCTCCTGATCCTGTTATTAACACTTGCAATGGCTTTTATTGTGATTACTTCTCTCCAAATAAGGCTTACAAACCAAAGATGTGGACAGAAGCTTGGACTGGCTGGTTTACTGAGTTTGGAGGTCCAGTTCCTCACAGACCTGCTCAGGACTTGGCATTTTCTGTTGCAAGGTTTATACAGAAAGGGGGATCATTTGTCAATTATTACATGTATCATGGAGGAACAAATTTCGGTCGAACTGCTGGTGGTCCTTTTATTGCTACAAGTTATGATTATGATGCTCCTCTTGATGAATATGGATTGCTTAGGCAGCCAAAATGGGGTCATCTGAAGGATTTACACAGAGCAATAAAGCTCTGTGAACCTGCTTTAGTATCCGGCGATCCAATTGTAACACGGCTTGGAAACTACGAAGAGGCTCATGTCTTCAAATCAAAGTCTGGAGCTTGTGCTGCATTTCTTGCAAACTACAACCCACGATCATATGCAACAGTGGCGTTTGGAAATTTGCATTATAACTTACCTCCTTGGTCAATAAGCATTCTTCCTGACTGCAAGCACACTGTTTATAACACTGCAAGGGTTGGTGCACAGAGTGCACAGATGAAGATGACTCGTGTTCCTATTCACGGAGGGCTCTCTTGGAAAGCATTCAATGAAGAGACAACCTCTACTGATGATAGTTCCTTCACTGCTAGTGGTTTGTTGGAGCAGATAAACACCACAAGAGATTTATCTGACTACTTGTGGTACTCCACAGATGTCGTGATCAATCCAAACGAAGGATTCTTGAGGAATGGAAAGAATCCTGTTCTTTCAGTATTATCTGCTGGGCATGCTTTGCATGTTTTTGTCAATGATCAGCTATCTGGAACTGTATATGGAAGCTTAGAATTCCCAAAACTAACATTTAGCGAGGGTGTGAAGCTCAGAGCTGGTGTTAACAAAATCTCCCTTCTTAGTGTTGCAGTTGGGCTCCCGAATGTTGGTCCACATTTTGAAACATGGAATGCTGGTGTGCTTGGCCCAATTACATTAAATGGTCTCAATGAGGGGAGAAGGGACTTAACTTGGCAGAAATGGTCTTACAAGGTTGGTCTAAAAGGTGAAGCCTTGAGTCTTCATTCACTTAGTGGAAGTTCCTCGGTGGAGTGGCTTCAGGGTTCTTTAGTTTCCCGAAGGCAACCATTGACTTGGTATAAAACCACTTTTGATGCTCCAGCAGGAAGTGCACCGTTGGCTTTAGACATGGCCAGCATGGGCAAAGGTCAAGTGTGGATAAATGGACAGAGTCTGGGCCGCTACTGGCCTGCATATAAAGCAGCATCTGGTTCTTGTGGATACTGTGATTATGCAGGGACTTATAATGAGAAGAAATGCTCAAGCAACTGTGGCGAGGCTTCTCAAAGATGGTATCATGTTCCTCATTCTTGGCTGAAGCCAGCTGGGAATTTGTTGGTTGTGTTTGAGGAATTGGGTGGAGATCCTAATGGGATCTTTTTGGTTAGAAGGGATATAGATAGTGTGTGTGCATATATTTATGAGTGGCAGCCAAATCTTGTGAGTTATCAGATGCAAGCTTCTGGCAAAGTGAGAACACCTGTGAGGCCAAAGGCACATTTGTCATGTGGTCCTGGCCAGAAAATCTCTTCAATCAAATTTGCTAGCTTTGGCACTCCAGTAGGGTCTTGTGGAAACTACCATGAGGGAAGCTGTCATGCTCACAAGTCATATGATGCCTTTGAAAAGAGTTGTGTCGGGCAGAACTCATGTGCAGTGACAGTGGCACCTGAAATTTTTGGAGGGGATCCATGTCCAAATGTCATGAAGCAGCTCGCAGTAGAGGCCATTTGCACCTGA 2520 0.4401 MGLNKLIVWNVLLACSLIGHASASVSYDHKAIAINGQRRILLSGSIHYPRSTPEMWPDLIQKAKEGGLDVIQTYVFWNGHEPSPGKYYFGGNYDLVKFIKLVQQAGLYVHLRIGPYVCAEWNFGGFPVWLKYIPGIHFRTDNGPFKFQMQKFTKKIVDMMKAERLYESQGGPIILSQIENEYGPMEYEIGAPGKAYTQWAAHMAVGLGTGVPWVMCKQDDAPDPVINTCNGFYCDYFSPNKAYKPKMWTEAWTGWFTEFGGPVPHRPAQDLAFSVARFIQKGGSFVNYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDLHRAIKLCEPALVSGDPIVTRLGNYEEAHVFKSKSGACAAFLANYNPRSYATVAFGNLHYNLPPWSISILPDCKHTVYNTARVGAQSAQMKMTRVPIHGGLSWKAFNEETTSTDDSSFTASGLLEQINTTRDLSDYLWYSTDVVINPNEGFLRNGKNPVLSVLSAGHALHVFVNDQLSGTVYGSLEFPKLTFSEGVKLRAGVNKISLLSVAVGLPNVGPHFETWNAGVLGPITLNGLNEGRRDLTWQKWSYKVGLKGEALSLHSLSGSSSVEWLQGSLVSRRQPLTWYKTTFDAPAGSAPLALDMASMGKGQVWINGQSLGRYWPAYKAASGSCGYCDYAGTYNEKKCSSNCGEASQRWYHVPHSWLKPAGNLLVVFEELGGDPNGIFLVRRDIDSVCAYIYEWQPNLVSYQMQASGKVRTPVRPKAHLSCGPGQKISSIKFASFGTPVGSCGNYHEGSCHAHKSYDAFEKSCVGQNSCAVTVAPEIFGGDPCPNVMKQLAVEAICT* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2717 839 PANTHER BETA-GALACTOSIDASE RELATED 9 833 IPR001944 GO:0004553|GO:0005975
Dod06g2717 839 SUPERFAMILY Galactose-binding domain-like 579 747 IPR008979 -
Dod06g2717 839 PANTHER BETA-GALACTOSIDASE 9 833 - -
Dod06g2717 839 Gene3D - 744 839 IPR043159 -
Dod06g2717 839 Gene3D - 601 729 - -
Dod06g2717 839 PRINTS Glycosyl hydrolase family 35 signature 35 52 IPR001944 GO:0004553|GO:0005975
Dod06g2717 839 PRINTS Glycosyl hydrolase family 35 signature 615 629 IPR001944 GO:0004553|GO:0005975
Dod06g2717 839 PRINTS Glycosyl hydrolase family 35 signature 111 130 IPR001944 GO:0004553|GO:0005975
Dod06g2717 839 PRINTS Glycosyl hydrolase family 35 signature 304 320 IPR001944 GO:0004553|GO:0005975
Dod06g2717 839 PRINTS Glycosyl hydrolase family 35 signature 56 74 IPR001944 GO:0004553|GO:0005975
Dod06g2717 839 PRINTS Glycosyl hydrolase family 35 signature 247 262 IPR001944 GO:0004553|GO:0005975
Dod06g2717 839 PRINTS Glycosyl hydrolase family 35 signature 168 183 IPR001944 GO:0004553|GO:0005975
Dod06g2717 839 PRINTS Glycosyl hydrolase family 35 signature 284 299 IPR001944 GO:0004553|GO:0005975
Dod06g2717 839 PRINTS Glycosyl hydrolase family 35 signature 642 658 IPR001944 GO:0004553|GO:0005975
Dod06g2717 839 SUPERFAMILY Galactose-binding domain-like 399 570 IPR008979 -
Dod06g2717 839 SUPERFAMILY (Trans)glycosidases 24 341 IPR017853 -
Dod06g2717 839 Pfam Galactose binding lectin domain 761 838 IPR000922 GO:0030246
Dod06g2717 839 Pfam Beta-sandwich domain in beta galactosidase 344 415 IPR041392 -
Dod06g2717 839 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 170 182 IPR019801 GO:0004553|GO:0005975
Dod06g2717 839 Pfam Glycosyl hydrolases family 35 32 336 IPR031330 -
Dod06g2717 839 Gene3D Glycosidases 19 340 - -
Dod06g2717 839 ProSiteProfiles SUEL-type lectin domain profile. 753 839 IPR000922 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2717 Dod-Chr6 58252596 58259304 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2717 11 838 Glycoside Hydrolase AT3G13750 81.039 0.0 1425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2717 - - gmx:100785688 1623.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2717 06 58252596 58259304 Dod06g2717 06 58252596 58259304 ECH
Dod10g1915 10 40802479 40808717 Dod06g2717 06 58252596 58259304 PCT