Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2712 ATGACAATCTCTTCCGATATTCAAGCAATTCAAAATCCCTCTCTTTCTCCGTATCTCAAGTGCTTTCTTTCCATGTCACTGAGATGGGATGACATGGATACGTCCCTCTCTTTGAGGTCGAGCTTGACGTTGGGAGAGACGCTGTGTGCGGTGTTCATTCCACTGATCGGAATCGCAGAGGCTCTGTTCTTCAGCCTCGCTGGTTGCTTCGATCTCCATCGGAACAACCACAACAAGAGCAGCAAGACTCAGATCCCTACCTCCTTCGACGAAATCGTTCGCCTCTCCAAGGATTCTCCATTTACGGTTAATGAAATTGAGGCGTTGCGTGAGCTGTTCAAGAAGTTGAGTAGTTCAATCATTGATGATGGACTCATTCACAAGGAAGAGCTGACATTGGCACTATTGAAGACCCCAGCTAGTGAGAATCTTTTCCTTGATAGGGTGTTTGATCTCTTCGATGAAAAAAGAAATGGCGTTATAGAATTTGAGGAATTTGTGCACGCCCTCAGTATCTTTCATCCATATGCTCCTTTAGAAAAGAAAATTGATTTTGCTTTTAGATTGTATGACTTGAGACAGACTGGATACATTGAGCGAGAAGAAGTTAGGCAAATGGTGGCTGCGATAATGTCAGAAACTGGCATGCATCTGGAAGATGAAATTCTTGAAACCATTATTGATAAGACATTTGAAGTTGCTGATACTGACAACGATGGTAAGATAAGTAAAGAAGAATGGAGGGCCTTTGTTGTTCGGCACCCAACACTATTGAAGCACATGACTCTTCCTTACCTGAAGGACATTACCACAGTGTTTCCCAGTTTCATTTTCAACACCGAAGTTGATGATTCTCACTGGCAAAACAATATTATAAATCATAAATATTAA 891 0.4198 MTISSDIQAIQNPSLSPYLKCFLSMSLRWDDMDTSLSLRSSLTLGETLCAVFIPLIGIAEALFFSLAGCFDLHRNNHNKSSKTQIPTSFDEIVRLSKDSPFTVNEIEALRELFKKLSSSIIDDGLIHKEELTLALLKTPASENLFLDRVFDLFDEKRNGVIEFEEFVHALSIFHPYAPLEKKIDFAFRLYDLRQTGYIEREEVRQMVAAIMSETGMHLEDEILETIIDKTFEVADTDNDGKISKEEWRAFVVRHPTLLKHMTLPYLKDITTVFPSFIFNTEVDDSHWQNNIINHKY* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2712 296 ProSitePatterns EF-hand calcium-binding domain. 235 247 IPR018247 -
Dod06g2712 296 PANTHER EF HAND CALCIUM-BINDING FAMILY PROTEIN 31 284 - -
Dod06g2712 296 Gene3D - 93 285 - -
Dod06g2712 296 Pfam EF-hand domain pair 123 167 IPR002048 GO:0005509
Dod06g2712 296 SUPERFAMILY EF-hand 95 276 IPR011992 -
Dod06g2712 296 CDD EFh 182 251 IPR002048 GO:0005509
Dod06g2712 296 ProSiteProfiles EF-hand calcium-binding domain profile. 222 257 IPR002048 GO:0005509
Dod06g2712 296 SMART efh_1 145 173 IPR002048 GO:0005509
Dod06g2712 296 SMART efh_1 226 254 IPR002048 GO:0005509
Dod06g2712 296 SMART efh_1 182 210 IPR002048 GO:0005509
Dod06g2712 296 PRINTS Recoverin family signature 149 170 - -
Dod06g2712 296 PRINTS Recoverin family signature 242 262 - -
Dod06g2712 296 PRINTS Recoverin family signature 196 214 - -
Dod06g2712 296 CDD EFh 146 208 IPR002048 GO:0005509
Dod06g2712 296 Pfam EF-hand domain pair 181 250 IPR002048 GO:0005509
Dod06g2712 296 ProSiteProfiles EF-hand calcium-binding domain profile. 141 176 IPR002048 GO:0005509
Dod06g2712 296 PANTHER CALCINEURIN B 31 284 IPR045198 GO:0005509|GO:0019722|GO:0019900
Dod06g2712 296 ProSiteProfiles EF-hand calcium-binding domain profile. 178 213 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2712 Dod-Chr6 58166824 58172058 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2712 65 285 EF-hand Containing Proteins AT5G55990 59.729 2.19e-92 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2712 K06268 - gmx:100801943 396.356