Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2676 ATGGTTCTTAAAATACTCATTAGTTGCCACGTTCTTGTCCGGCATTCAGAAGAGACCAAGTACGAGGTTTCCAACAACAACCACCACCACCACCACCGCCGCTGCCACCATCAACCTCATCCCTACCAATCCCACACCGAACAATCCCTCAACCAAAAGGCCAAGACCTCGATTTCATCAACGTTGTCCACAGCCATATCATTCACTCCCACTGGGACAAGCTCCAACCTTTACCACACTCGTTCACACCTTTCAGACTCAAGCACATCCTCCTCAAGCTCCAAAACGATGCCGTTTTGTCCCTCCGGTTCTCCAAATGGGTCCAAACACACAGCCCCAGTTCCCAAACCCTCGAAACAAATGCCATCCTCCTCCACACCCTCGCAAAAAGCAACAACTTCAAAGCCACACAAACAATCCTCAAGAGAATCATCAGTTTCTGGTCCCTTAAACTTGCCTTCTAACCTCTTTGAAGCTTTGTTGTACTCTTATCGATTGTGTGATTCCACGCCAAGCATTTTTGACTCTCTTTTCAAGACCCTTGCGCACTTGAAAAGGCTTAGAAACGCCACTGACACATTTTGTCGCATGAAGGAACATGGGTTCTTTCCCACTGTTGAGTCCTGCAATGCTTTTATGAGTTCTTTGCTTCAATTACAAAGACCAGAGATTGCTTTGTTGTTCTACCGTGAAATGAAGAGGTCTTGTGTCTTGGTTAATGTTTACACTTTTAACATGGTTATATGTGCTTATTGCAAGTTGGGGGAATTGCAGAAGGGTTGTGAGGTGTTGGAGAAGATGAGGGACAGGGGTTTGAGTCCAAATGTTGTGTCTTTCAATGCATTGATTTCTGGGTATTGTAACAAGGGTATGGTTGGTTTTGCCTTGAAGGTTAAGTCCTTGATGGAGAATAATGGGGTGAAGCCAAATGTGGTCACTTTTAACACAATCATTAATGGGTTCTGTAAGGAGAGGAAGTTGCACTGA 987 0.4488 MVLKILISCHVLVRHSEETKYEVSNNNHHHHHRRCHHQPHPYQSHTEQSLNQKAKTSISSTLSTAISFTPTGTSSNLYHTRSHLSDSSTSSSSSKTMPFCPSGSPNGSKHTAPVPKPSKQMPSSSTPSQKATTSKPHKQSSRESSVSGPLNLPSNLFEALLYSYRLCDSTPSIFDSLFKTLAHLKRLRNATDTFCRMKEHGFFPTVESCNAFMSSLLQLQRPEIALLFYREMKRSCVLVNVYTFNMVICAYCKLGELQKGCEVLEKMRDRGLSPNVVSFNALISGYCNKGMVGFALKVKSLMENNGVKPNVVTFNTIINGFCKERKLH* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2676 328 MobiDBLite consensus disorder prediction 42 58 - -
Dod06g2676 328 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 154 328 - -
Dod06g2676 328 MobiDBLite consensus disorder prediction 70 149 - -
Dod06g2676 328 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 275 309 IPR002885 -
Dod06g2676 328 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 170 204 IPR002885 -
Dod06g2676 328 MobiDBLite consensus disorder prediction 23 58 - -
Dod06g2676 328 Gene3D Tetratricopeptide repeat domain 147 267 IPR011990 GO:0005515
Dod06g2676 328 PANTHER ATPASE EXPRESSION PROTEIN 3 154 328 - -
Dod06g2676 328 TIGRFAM PPR: pentatricopeptide repeat domain 277 311 IPR002885 -
Dod06g2676 328 TIGRFAM PPR: pentatricopeptide repeat domain 242 276 IPR002885 -
Dod06g2676 328 TIGRFAM PPR: pentatricopeptide repeat domain 208 240 IPR002885 -
Dod06g2676 328 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 240 274 IPR002885 -
Dod06g2676 328 Pfam PPR repeat family 274 323 IPR002885 -
Dod06g2676 328 Pfam PPR repeat family 204 253 IPR002885 -
Dod06g2676 328 Gene3D Tetratricopeptide repeat domain 268 328 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2676 Dod-Chr6 57112424 57114893 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2676 155 327 Glycosyltransferase AT1G05670 31.034 3.18e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2676 - - adu:107464028 317.005