LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod06g2662	ATGAGCCTCATCCTCGTCGAGATTGCTCCCAGCAATCTTCGTGGCGAGACATTAGACTTGCAGCACGCTGCCGCGTTCCTCCCACGCACCAACATCCACGCCTCCACCGCCTACTCAGTCACAGCGGGCTCTGACCTTTGCATCTTCACTACAGTGTCGCATTGCTTTTGCACAGTGATCATGATCAAGCTGAAGATTTTGGTCGTGAATGCAGAGATGAGGGAAGGTCGTGGGAGTCAAGTGAATTTAGGAGGAGGTTTAAGGAAAAATTCCAGTTTTTGCAGCAATGTTTCGGAAGGGGATACTGTGGATATTGAAGAAGCATGCCTGAAAAGGGTGATCAGTAACAATTCCCTAATTGGTCACTCTCCAAGAAGTAAACAAACTGGGGAGAAAGATGAGTTTCTCTTACATGAATTCAGTGATCATGTGAAGGAAGCAGACTTTGGACACACCACAGGAAGAAGTTCTTTTAAGAGAGATGTAGAAACACAAAGATCAAGAGTGGGTTCTCCTACAGCATATGGAAACCGTGAAAGGGATGACCATGAACAAGAGATCAGGCAACTAAGGAACATGATTGGAGTGCTTCAAGAGAGGGAAAGAAGCCTTGAGGTTCAACTGCTTGAGTATTGTGGTCTTAGGGAGCAAGAAACAGCAGTGATGGAGCTCCAGAATAGATTGAAGATAAGTAGCATGGAGGCAAAGATGTTCAATCTGAAGGTTGAGACCTTACAGTCTGAGAACAGAAGATTAGAGGCACAATTGGCTGATCATGCAAGGGTGCTTGCTGAGCTTGAGACTGCGAAAACAAAAGTCAAATTTTTTAAGAAGAAAATTAGGTATGAGGCAGAACAGAATAGGGAGCAGATCATGAACCTTAAACAAAAAGTTTCCAAGTTGCAAGACCAAGAATCCAAATCGGCTTTGAGCGATCGAGAAGTTGAATCAAAACTCGAAAGGCTAAAGGAACTTGAGTCTGAGGCAGAAGAGTTGAGGAAATCTAACATGAGACTACAGATGGAAAATTCTGACTTAGCTAGAAGATTGGAATCTACTCAAATCCTTGCACAAACTGTTCTGGAGGAGCCGGAGGCAGATGCACAAAAGAAAGAAAGTGAGCGGATTAGACAAGAGAATGAGGGCCTGGTTAAGGAAATGGAGCAACTGCAAGCTGATAGATATTCAAATGTTGAAGAATTAGTGTACTTGAGGTGGATAAATGCTTGCTTAAGACATGAACTAAGGCATTATCATCCCCCACCTGGCAAAACAGCTGCAAGAGACTTGAGCAAAAGCTTAAGCCCTACATCTGAGAAGAAAGCTAAGCAGCTTATACTTGAGTATGCTAACACTGATGGACTAGGGAACATTTCTTTTGCAGATTCTGACCAATGGTCCTCCTCACAGGCTTCCTTTCAAACAGACTCAGGAGATACTGATGATTATTCTCCTCATGACAATTCGTCTGATGCGAGAGCTAACCCTGTGAATAAGACCAAGGTTTTTGGCAAGCTTATGAAGCTGATTCGAGGCAAAGATAGCCAGCATCATCTTAGCCGAGTTACGTCAAGAGAAAAATCTAGATCTCAAGACGATAGCAATTCTCCGCGATTAAGCTCATCAACTGCAAATGATGCTGTAGCTGATGGTAGTAGAAGTGAGTATGTAACTCCCAGTAACACAGCTAGAACTTCCTTGGATTTCGAAAGGCCACAAAGCTTGAAGGAGGAAGATAGGAGAAATTCAGATAGCCTTGTAGTAGGAAGCTCAAAGAGCTTCAGTCCAAAGAATAGAAATTCAGTAGATTCAAAAAATCAGGTTGACTCTTTCTCAGCTTCCTCAGGCATAGAGAAGTCTAATTTGGTGAAATATGCTGAAGCTTTGAAAGATTCTAGAGGAAGCGCCAAACGGGTGGTAAATAGAAGATCAGCATCATATAGTTCATTTTAA	1953	0.4291	MSLILVEIAPSNLRGETLDLQHAAAFLPRTNIHASTAYSVTAGSDLCIFTTVSHCFCTVIMIKLKILVVNAEMREGRGSQVNLGGGLRKNSSFCSNVSEGDTVDIEEACLKRVISNNSLIGHSPRSKQTGEKDEFLLHEFSDHVKEADFGHTTGRSSFKRDVETQRSRVGSPTAYGNRERDDHEQEIRQLRNMIGVLQERERSLEVQLLEYCGLREQETAVMELQNRLKISSMEAKMFNLKVETLQSENRRLEAQLADHARVLAELETAKTKVKFFKKKIRYEAEQNREQIMNLKQKVSKLQDQESKSALSDREVESKLERLKELESEAEELRKSNMRLQMENSDLARRLESTQILAQTVLEEPEADAQKKESERIRQENEGLVKEMEQLQADRYSNVEELVYLRWINACLRHELRHYHPPPGKTAARDLSKSLSPTSEKKAKQLILEYANTDGLGNISFADSDQWSSSQASFQTDSGDTDDYSPHDNSSDARANPVNKTKVFGKLMKLIRGKDSQHHLSRVTSREKSRSQDDSNSPRLSSSTANDAVADGSRSEYVTPSNTARTSLDFERPQSLKEEDRRNSDSLVVGSSKSFSPKNRNSVDSKNQVDSFSASSGIEKSNLVKYAEALKDSRGSAKRVVNRRSASYSSF*	651

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod06g2662	650	Coils	Coil	366	393	-	-
	Dod06g2662	650	Coils	Coil	277	304	-	-
	Dod06g2662	650	MobiDBLite	consensus disorder prediction	586	616	-	-
	Dod06g2662	650	Gene3D	-	1	54	-	-
	Dod06g2662	650	MobiDBLite	consensus disorder prediction	570	585	-	-
	Dod06g2662	650	PANTHER	PROTEIN CHUP1, CHLOROPLASTIC	73	650	IPR040265	-
	Dod06g2662	650	Coils	Coil	308	349	-	-
	Dod06g2662	650	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	3	51	IPR036291	-
	Dod06g2662	650	MobiDBLite	consensus disorder prediction	418	437	-	-
	Dod06g2662	650	MobiDBLite	consensus disorder prediction	469	616	-	-
	Dod06g2662	650	PANTHER	FAMILY PROTEIN, PUTATIVE-RELATED	73	650	-	-
	Dod06g2662	650	Coils	Coil	180	207	-	-
	Dod06g2662	650	Coils	Coil	214	269	-	-
	Dod06g2662	650	MobiDBLite	consensus disorder prediction	534	569	-	-
	Dod06g2662	650	MobiDBLite	consensus disorder prediction	151	183	-	-
	Dod06g2662	650	MobiDBLite	consensus disorder prediction	151	166	-	-
	Dod06g2662	650	MobiDBLite	consensus disorder prediction	631	650	-	-
	Dod06g2662	650	MobiDBLite	consensus disorder prediction	507	533	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod06g2662	Dod-Chr6	56690145	56697016	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod06g2662	-		-	gmx:100781632	689.493

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dod06g2662	06	56690145	56697016	Dod06g2662	06	56690145	56697016	ECH
	Dod10g1945	10	41259071	41262587	Dod06g2662	06	56690145	56697016	PCT