Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2623 ATGGAAAGCAACCTACCAGTGATCGCTAAGAGAGTGTGGAACATAATACGTGTTGCCTTCTACATGTTGAGGAAAGGCATATTAAAGGGGAAGCTCGTGATGGACCTCAACATGGTCCTCAAACGTCGCCGCTGCAAGCTCGCCGGAAAAGCCATCAGCAACCTCATGGCGTTCCACCACAACCACCATGATGACACGCGCCTCCACCAATTCTCCACCACAAGGGAGTACGAGTTCAGCTGCAGCAACACGCCAAACAACCACTTCTTTTCCATTGGGAACAAGCGCAATAACCGCCGCAACAGCTTCTTCACGCGCGCCCACGCGCCTCCCAGGTGCGACAACGACGACGCGGTGACGGTTAGTGCTGTTAATGCTGTGTTGGAAATGCTGAACAATGAGGGTGTGGTTGAGGCGTCGCCGGCTCTGCCAGGGTTCGGTCGGAGCCCTATGGTGGTGAGGCAGCTGAGGGTGACGGACTCGCCGTTCCCGGTGGGGAACTTGGAGGAAGATAAGGACAATCAGGTGGACAAGGCTGCTGAAGAGTTCATAAAGAGGTTCTACAAGGATTTGAAGAAACAGGGTTGA 588 0.5408 MESNLPVIAKRVWNIIRVAFYMLRKGILKGKLVMDLNMVLKRRRCKLAGKAISNLMAFHHNHHDDTRLHQFSTTREYEFSCSNTPNNHFFSIGNKRNNRRNSFFTRAHAPPRCDNDDAVTVSAVNAVLEMLNNEGVVEASPALPGFGRSPMVVRQLRVTDSPFPVGNLEEDKDNQVDKAAEEFIKRFYKDLKKQG* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2623 195 Pfam Cotton fibre expressed protein 173 194 IPR008480 -
Dod06g2623 195 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 1 194 - -
Dod06g2623 195 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2623 Dod-Chr6 55923530 55924222 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2623 - - gmx:100801941 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2623 06 55923530 55924222 Dod10g1963 10 41455626 41456627 ECH
Dod02g3524 02 72461579 72462729 Dod06g2623 06 55923530 55924222 ECH
Dod06g2623 06 55923530 55924222 Dod06g2623 06 55923530 55924222 ECH
Dod10g1962 10 41453901 41454789 Dod06g2623 06 55923530 55924222 PCT