Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod06g2586 | ATGGCGAACCAGGTGACAGTGAGGGACCTCGTGGAGGAAGCGAAGAAGAGGATTGTCATCCTGGTCGTTTGCGTCGTTGGAGTCTCCTATCTCATGTCCTTGACAAGCTCCTCAGTTTGGGTCAACTTGCCAGCTGCAGCCTCCTTAATTATCTTTCTCCGGTATTTATCTCTAGATTTTGAAATGAAGAGAAAAGCTGCAGCATACAACAATAAAGCAAGCTCAAGCAATGTGCAGTCTTCAAAGAAGCCTTCTGAAAATCCTAAGGTTGTTGCGAAGTTTGAGTGGAGAAAAAAGGTGAATTCTCCTGTTGTTGAGGATGCAATTGATCACTTCACCAGGCATCTAGTTTCTGAGTGGGTGACTGACCTGTGGTACTCTCGCCTAACACGAGACAGAGAGGGTCCTGAGGAGTTAGTGCAACTAATAAATGGTGTTATTGGGGAAATTTCAGGACGCATGAGAAATATAAATCTGATTGATTTCCTGATAAGGGATCTCATTAATCTCATTTGCACACACTTGGAGCTCTTTCGTGCTGCCCACTCAAAGATTGAAAAACAACAGACAGGTTCATTAACAATTGAAAGTAAAGATACGGAGCTAAAAATTGTCCTGGCTGCCGAGAACAAATTGCATCCTGCTTTATTTTCTGCTGAAGCAGAGCATAAGGTTTTGCAGCATCTGATGAGTGGCCTTATGTCTGTAACTTTCAAGTCTGAGGATTTGCAGTGTTCTTTCTTTCGATATACTGTAAGGGAGCTCCTTGCCTGTGCTGTAATGCGGCCGGTCCTAAACTTAGCCAATCCAAGATTCATTAATGAAAGAATTGAATCTATAGTAGTTAATAGAACCAAGGTTAATCAGGTGGCTGCAACAACTGTAGAGGCATCTCAGACTATTATAGATGAATTGCAGACTTTGGGTGACCATTTTTCAAAGGGATCAGATCCTTCTGTGACTGGTGTTGAGCTTGTGCAGCTAAAAAATGGTCAACCCAAAAACGCAGAGTCATCTGCAAAAAGTAAAGAGCACGATAATACTGCTAAAGATCCATTGCTTGCAATCGATGCTCAATCTTCCCGTTCGTGGAGCTCATTGCCTGCAAACTCCCAAACTAATGATGAGCAAGGTATTCATCGCCATCACTCAGGAGGAGAGTGGGGAGATATCTTAGATGTCATCTCTCGCAGAAAGACCCAAGCCCTTGCTCCAGAACATTTTGAGAACATGTGGACAAAGGGGAAAAATTACAAGAAAACAGATGGTGACAACCAGTCAAATGAGCAAGTCCAGCAGCATCCTGTAGTAGGACAATCGCGAAAGGTAGATCATATGAAGGTAAAGTCTGGAATCCAAGAAAAAGAAACCAATGCAAAGATTAATCCCTCAAAGGGAAGCCGCATTAATTCTGGATATAGCAGTAGGTTCACTGTTGAAAATTTACCCTTTCATGTGGACAAGAATGGGTCAACTTGTTCCTCAGTTACCTCATATAAAGACAATGAGCGCAACCAGATACATATGCATGTGGATGAATCTGAGAGCAGTACTTCTTATACTTCTGAAGATGATGAAACTAATTCTGTCACTGGTCTTGATTCTCCTGGAACTATGGTTTGGGATGGCAGAAGTAATAGAAACCAGGCTGTTTCTTATGTTCATCACCCACTCGAAAATGTTGATAATCATGGTACAAAGAAGAGGCATAAGAGCCATTCTCGGTATCCTAGATTAACCAGAACACAGTCTGGTAGCAAAAGGTCTAGGCCAAGTGGTCATAACACACATATGTGGCATGAAGTTGAGAGGACAAGCTTTTTATCTGGAGATGGTCAAGACATACTCAATCTTTCAAAATCACATGTAAATTCTGACGACTCCAGCGATGATGCTTATATTGAGAATTTGGGTAGAATTTATAGTGGAGCAGCGGCATCTTCTTCTGCATCTTCTATTTCAAAATCAGAATCTTGTAGTTTGGCTGTTAATCCCCTGAAAAGCTCCTCAGCCGTAGATTCCTTTTTCAAGTTGAGATGTGAGGTCTTAGGTGCTAATATCGTGAAGAGTGGCTCAAGAACATTTGCTGTTTACTCCATATCTGTAACAGATATAAATAATAACAGTTGGTCAATTAAAAGAAGGTTTCGACATTTTGAGGAGCTACATCGACGCCTGAAAGAATTCCCTGAGTATAATCTTCATTTGCCTCCCAAACATTTTCTGTCAACAGGTTTAGATGTACCAGTCATTCAAGAGCGGTGTGAATTGCTGGATAAATATTTGAAGGAACTTATGAAGCTACCAACAGTTTCAGAATCAATTGAAGTATGGGACTTTCTGAGTGTTGACTCTCAGACATACATATTCTCGAATTCTTTTTCTATCATGGAAACATTACCAGTTGGCCTGGATGCTAAGCCATCTGAGAAGTCTAAAAGCACTTCCAACATCTCTGCACCTGCAAGCGACCCTTTTGGCTCTCGAACAGAAAACTATAGTGCTGACAGTAAAGAGGCTGTTTTGCGAGCAAGAAATAATGCTGTGGCTGATGGATTGAGGTCAAAAGTAAATGGCGTGCCTCTTTCTCTACCAAAAATGAATGCACAGGAATCTAGAAAGTCATGTGACAATTCTAGCAGCAATGTAGATATTCTAGCATTGAAGAATGCACCTTCTCCCAATAACTTGCAGAAGACAGTGAAAAGAAGAGATGGTTCAGAGATGCCTGATGTGCAGCATGATACCTCTGATTCTCTTCCAACAGAGTGGGTGCCACCAAATTTGAGTGTACCAATATTGGATCTGGTTGATGTTATCTTCCAGGTTCAAGATGGTGGATGGATGAGGCGGAAGGCGTTTTGGGTTGCTAAACAAGTCTTACAACTAGGAATGGGTGATGCCTTTGATGATTGGTTGATAGAGAAAATCCAGCTTCTCCGCACGGGGTCAGTTGTTGCTTCTGGGGTCAGCCGAGTTGAGCAAATTCTCTGGCCTGACGGAATATTCATAACCAAGCACCCAAATAGACGACCTCCTCCACCTGATAGTGCATCTCAGGGTTCACCTCATGGCCATAAATCTCCAGAAGTGTCTTCCCCGAGGATAAATGACGAGCAGCAAAAGGAGGCAGAGCGGCGTGCAAAGTTTGTATATGAGCTTATGATTGATCATGCACCACCAGCAATTGTAGGTCTTGTTGGTCGGAAGGAATATGTGCAGTGTGCTAGTGATCTATATTTTTTTCTTCAGTCATCTGTTTGCTTGAAGCAGCTGGCTTTTGACATCCTTGAGCTGCTGCTGCTGTCAGCATTTCCAGAACTAGATGATGCATTCAGGCAGGTGCATCAAGAAAAGCATAAATTCGGTGAGTTCAAACCAACGTGA | 3387 | 0.4231 | MANQVTVRDLVEEAKKRIVILVVCVVGVSYLMSLTSSSVWVNLPAAASLIIFLRYLSLDFEMKRKAAAYNNKASSSNVQSSKKPSENPKVVAKFEWRKKVNSPVVEDAIDHFTRHLVSEWVTDLWYSRLTRDREGPEELVQLINGVIGEISGRMRNINLIDFLIRDLINLICTHLELFRAAHSKIEKQQTGSLTIESKDTELKIVLAAENKLHPALFSAEAEHKVLQHLMSGLMSVTFKSEDLQCSFFRYTVRELLACAVMRPVLNLANPRFINERIESIVVNRTKVNQVAATTVEASQTIIDELQTLGDHFSKGSDPSVTGVELVQLKNGQPKNAESSAKSKEHDNTAKDPLLAIDAQSSRSWSSLPANSQTNDEQGIHRHHSGGEWGDILDVISRRKTQALAPEHFENMWTKGKNYKKTDGDNQSNEQVQQHPVVGQSRKVDHMKVKSGIQEKETNAKINPSKGSRINSGYSSRFTVENLPFHVDKNGSTCSSVTSYKDNERNQIHMHVDESESSTSYTSEDDETNSVTGLDSPGTMVWDGRSNRNQAVSYVHHPLENVDNHGTKKRHKSHSRYPRLTRTQSGSKRSRPSGHNTHMWHEVERTSFLSGDGQDILNLSKSHVNSDDSSDDAYIENLGRIYSGAAASSSASSISKSESCSLAVNPLKSSSAVDSFFKLRCEVLGANIVKSGSRTFAVYSISVTDINNNSWSIKRRFRHFEELHRRLKEFPEYNLHLPPKHFLSTGLDVPVIQERCELLDKYLKELMKLPTVSESIEVWDFLSVDSQTYIFSNSFSIMETLPVGLDAKPSEKSKSTSNISAPASDPFGSRTENYSADSKEAVLRARNNAVADGLRSKVNGVPLSLPKMNAQESRKSCDNSSSNVDILALKNAPSPNNLQKTVKRRDGSEMPDVQHDTSDSLPTEWVPPNLSVPILDLVDVIFQVQDGGWMRRKAFWVAKQVLQLGMGDAFDDWLIEKIQLLRTGSVVASGVSRVEQILWPDGIFITKHPNRRPPPPDSASQGSPHGHKSPEVSSPRINDEQQKEAERRAKFVYELMIDHAPPAIVGLVGRKEYVQCASDLYFFLQSSVCLKQLAFDILELLLLSAFPELDDAFRQVHQEKHKFGEFKPT* | 1129 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod06g2586 | 1128 | MobiDBLite | consensus disorder prediction | 359 | 386 | - | - | |
| Dod06g2586 | 1128 | ProSiteProfiles | PX domain profile. | 676 | 788 | IPR001683 | GO:0035091 | |
| Dod06g2586 | 1128 | MobiDBLite | consensus disorder prediction | 1004 | 1039 | - | - | |
| Dod06g2586 | 1128 | MobiDBLite | consensus disorder prediction | 420 | 445 | - | - | |
| Dod06g2586 | 1128 | Gene3D | - | 674 | 792 | IPR036871 | GO:0035091 | |
| Dod06g2586 | 1128 | SMART | PXA_3 | 106 | 285 | IPR003114 | - | |
| Dod06g2586 | 1128 | MobiDBLite | consensus disorder prediction | 557 | 598 | - | - | |
| Dod06g2586 | 1128 | MobiDBLite | consensus disorder prediction | 806 | 832 | - | - | |
| Dod06g2586 | 1128 | CDD | PX_SNX19_like_plant | 678 | 782 | - | - | |
| Dod06g2586 | 1128 | PANTHER | PX SERINE/THREONINE KINASE PXK | 3 | 1125 | - | - | |
| Dod06g2586 | 1128 | MobiDBLite | consensus disorder prediction | 809 | 832 | - | - | |
| Dod06g2586 | 1128 | MobiDBLite | consensus disorder prediction | 359 | 375 | - | - | |
| Dod06g2586 | 1128 | MobiDBLite | consensus disorder prediction | 578 | 592 | - | - | |
| Dod06g2586 | 1128 | MobiDBLite | consensus disorder prediction | 503 | 543 | - | - | |
| Dod06g2586 | 1128 | SMART | PX_2 | 674 | 784 | IPR001683 | GO:0035091 | |
| Dod06g2586 | 1128 | MobiDBLite | consensus disorder prediction | 512 | 543 | - | - | |
| Dod06g2586 | 1128 | PANTHER | PHOX (PX) DOMAIN-CONTAINING PROTEIN | 3 | 1125 | - | - | |
| Dod06g2586 | 1128 | Pfam | PX domain | 706 | 784 | IPR001683 | GO:0035091 | |
| Dod06g2586 | 1128 | ProSiteProfiles | PXA domain profile. | 102 | 285 | IPR003114 | - | |
| Dod06g2586 | 1128 | Pfam | Sorting nexin C terminal | 948 | 1086 | IPR013937 | - | |
| Dod06g2586 | 1128 | SUPERFAMILY | PX domain | 677 | 785 | IPR036871 | GO:0035091 | |
| Dod06g2586 | 1128 | MobiDBLite | consensus disorder prediction | 900 | 923 | - | - | |
| Dod06g2586 | 1128 | Pfam | PXA domain | 102 | 279 | IPR003114 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dod06g2586 | Dod-Chr6 | 55126283 | 55136694 | Dispersed/Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dod06g2586 | K17925 | - | gmx:100790491 | 1734.15 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Dod06g2586 | 06 | 55126283 | 55136694 | Dod06g2586 | 06 | 55126283 | 55136694 | ECH |