Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2546 ATGGAGCTTATTTCGGGTCTTCCAGAAGACATAGCCCGAGACTGTTTAATTCGGGTCTCATACCAGCAGTTCCCGACGGTGGCATCGGTGTGCAAGGGGTGGAAGACGGAGGTTGAGTCGCCGGAGTTCCGCCTTCTACGGCGGAGCACCGGCAACGCACAGAAACTCCTTGTGATGGTTCAAGCACGGGTGGACCCGGAAAATAATAAACCCGGACCCGGTTCAACAAAGAGATTAACAAACCCGCTTTACCGGCTAACGGTGTTCGAACCGGTAACCGGTAACTGGAGCGAGTTGCCGCCACCACCCGGGTTCGAATCCGGGTTGCCCATGTTCTGTCGGGTTGTAGGGGTCGGGTCGGAGCTTGTTTTGTTGGGCGGGTTGGACCCGGATACGTGGAAGGCTTCTAACTCTGTTTTCATTTACGACCTCGCTACCGCGAAGTGGCGCCGCGGCGCTCACATGCCGTGTGGGCCCCGCAGCTTCTTTGGGTGCGGGTCTGATCAGCTTGGTCGTAAGGTGTTTGTCGCCGGTGGCCACGATGACGACAAGAACGCCTTGCGGTCTGTGCTTGTGTATGACGTGGCGGCGGATAAGTGGTTCCCGCTTCCCGATATGGCGGCGGAGCGTGACGAATGCACGGCGGTGTTTCGCCGAGAGCGGCTCGCCGTCGTCGGCGGTTACCGGACGGAGATGCAGGGCAGGTTTGAGAGGAGCGCGGAGGTCTTTGATTTTGCCACGTGGCAGTGGGGCCCGGTGGAGGAGAAGTTCCTCGATTGCGCCACGTGTCCGGGGAATCTGACGGACGGTGGCGGCCATGATGATGGGAATGGTGGTATGTTCATGTGCTGCGGCGGCGAGTTATTGGCGAGGAGTCATGGGGACACGTGGCAGAGGATGGCGAAGGTGCCGGGTGAGATACGCAACGTGGCGTATGTTGGAGCGTTGGATGGGGAAGTAGTGGTGGTGATTGGATCTAGCGGCCACGGTGAGGCTCATGTGTGTTTTGTGTTTGATTTGAAGAGTTGTAATTGGAAGAAATTGGAGACACCAGAAAGGTTCAGGGGCAATGTCCAGACAGGTTGCGTTTTGGAGATTTAG 1101 0.5767 MELISGLPEDIARDCLIRVSYQQFPTVASVCKGWKTEVESPEFRLLRRSTGNAQKLLVMVQARVDPENNKPGPGSTKRLTNPLYRLTVFEPVTGNWSELPPPPGFESGLPMFCRVVGVGSELVLLGGLDPDTWKASNSVFIYDLATAKWRRGAHMPCGPRSFFGCGSDQLGRKVFVAGGHDDDKNALRSVLVYDVAADKWFPLPDMAAERDECTAVFRRERLAVVGGYRTEMQGRFERSAEVFDFATWQWGPVEEKFLDCATCPGNLTDGGGHDDGNGGMFMCCGGELLARSHGDTWQRMAKVPGEIRNVAYVGALDGEVVVVIGSSGHGEAHVCFVFDLKSCNWKKLETPERFRGNVQTGCVLEI* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2546 366 SMART kelc_smart 121 170 IPR006652 GO:0005515
Dod06g2546 366 SMART kelc_smart 173 220 IPR006652 GO:0005515
Dod06g2546 366 Gene3D - 28 350 IPR015915 GO:0005515
Dod06g2546 366 SUPERFAMILY Kelch motif 81 350 IPR015915 GO:0005515
Dod06g2546 366 Pfam F-box domain 4 41 IPR001810 GO:0005515
Dod06g2546 366 PANTHER OS02G0208700 PROTEIN 1 366 IPR044595 GO:0080037|GO:2000762
Dod06g2546 366 Pfam Kelch motif 164 206 IPR006652 GO:0005515
Dod06g2546 366 Pfam Kelch motif 113 156 IPR006652 GO:0005515
Dod06g2546 366 SUPERFAMILY F-box domain 3 48 IPR036047 GO:0005515
Dod06g2546 366 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 1 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2546 Dod-Chr6 54621655 54623855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2546 7 200 Miscellaneous Gene Families AT4G33900 26.415 1.48e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2546 - - ccaj:109808365 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2546 06 54621655 54623855 Dod06g2546 06 54621655 54623855 ECH
Dod10g2032 10 42083157 42084947 Dod06g2546 06 54621655 54623855 PCT