Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2544 ATGGGTGCTTCGCTGCCCCCAAAGGAGGCCAACCTCTTCAAGCTCATTGTTAAATCTTATGAAACCAAACAATATAAAAAAGGCCTCAAAGCAGCTGATGCCATTTTGAAAAAATTTCCAGACCATGGAGAAACTTTATCGATGAAGGGTTTGACATTAAATTGCATGGATCGTAAGTCTGAAGCCTATGTACTTGTTCGTCAAGGATTAAAGAATGACCTTAAAAGTCATGTTTGCTGGCATGTCTTTGGTCTCCTTTATCGGTCAGACAGAGAATACAGGGAGGCAATCAAGTGCTACAGAAATGCACTGAAAATAGATCCTGACAATATCGAAATCCTGCGTGATTTATCCCTCTTACAGGCTCAAATGCGAGATTTAAGTGGCTTTGTGGAGACAAGGCAACAACTTTTGACTCTGAAGCCTAATCATCGCATGAACTGGATTGGTTTTTCTGTTGCCCATCATTTGAACTCTAATGCATCCAAGGCAGTTGAAATTTTGGAAGCATATGAAGGGACTTTAGAAGATGATTATCCTCCAGAAAATGAACGCTGTGAGCATGGGGAAATGCTTTTATATAAGATCTCTTTGTTAGAGGAATGTGGGTTTCTTGAGAGAGCTCTGGAGGAGTTGCGCAAAAAGGAGTCAAAAATTGTTGATAAACTTGCATATAAAGAACAAGAGGTTGCACTTTTAGTGAAGCTTGGTCGCTTAGAAGAAGGCGAAACTTTGTACCAGGCATTACTTTCCATGAATCCTGATAATTATAGGTACTATGAAGGTCTCCAAAAATGTGTTGGGTTGTATTCAGAAAATGGCCCGTACTCTCCTGATGAAATAGATCGGTTAGATTCCCTGTACCAAACACTCAGCCAGCAATATAAATGGTCATCAGCTGTTAAGAGAATACCGCTAGATTTTCTGCAAGGTGAAAAATTTCGAGAAGCAGCAGATAATTATATTAGGCCTCTCCTAACTAAGGGAGTTCCATCTCTGTTCTCTGATCTTTCTTCTTTATACAATCACCCTGGGAAGGCAGACATTTTGGAACAACTTATTCTAGAGTTAGAGCATTCAATTAGAACATCAGCCCAATATCCTGGGAGGGTGGAAAAAGAGCCCCCTTCAACTCTTATGTGGACTTTGTTTTTATTGGCTCAGCATTATGACAGACGGGGGCAGTATGAAATTGCTCTTTCCAAAATCGATGAGGCCATAGAACACACACCTACTGTGATTGATCTATATTCTGGCAAGAGTCGGATACTGAAGCATGCTGGTGATTTGGCTGCTGCTGCTGCATTTGCAGATGAAGCTAGGTGTATGGACCTTGCTGATCGTTATGTTAACAGTGAATGTGTTAAGCGCATGCTGCAGGCTGATAAGGTGGCTTTGGCAGAGAAAACTGCTGTATTATTTACAAAAGATGGGGATCAACACAACAACCTTCATGACATGCAGTGCATGTGGTATGAGCTTGCCTCTGGAGAAAGCTATTTCCGCCAGGGTGATCTTGGCCGGGCACTAAAGAAATTTTTAGCAGTGGAGAAGCATTATGCAGATATTACTGAAGACCAATTTGATTTTCATTCATACTGCTTAAGGAAAATGACCTTGCGTACTTATGTGGAAATGCTTAAATTTCAAGACCGATTGCATTCACATGTATACTTTCATAAAGCAGCAGCTGGAGCCATCGGATGTTATATTAAATTGCACGATTCTCCTCCAAAGTCTACAGCCGAGGAAGATGATGATATGTCAAAGTTGCTTCCTTCTCAGAAAAAGAAATTAAGACAAAAACAGAGAAAGGCAGAAGCAAAAGCTAAGAAAGAGGCAGAAGAAAAGAACGAAGAATTGAGTGCCAGTGGGGTATCAAAGTCTGGGAAACGCCATGTAAAACCTGCTGATCCTGATCCACACGGCGAGAAGTTGTTGCAGGTTGAAGATCCACTGTCAGAAGCCGCAAAGTACTTGAAGTTGCTGCAGAAGAATTCACCTGATTCATTGGAGACACATTTGCTCGCTTTTGAATTGTATATAAGAAAACACAAGATTTTGCTTGCCTTTCAGGCTGTGAAGCAGTTACTGAGGTTGGATGCTGAACATCCTGATTCTCATCGTTGCTTGATTAAATTCTTCCATAAAGTGGGGTCCATGAATGCTCCCGTGACGGACAGCGAGAAACTGATTTGGAGTGTCTTAGAAGCTGAACGCCCAACAATTAGTCAGCTGCATGAGAAATCTTTGCTCGAGGCTAACAACTCTTTCCTTGAAAAACATAAAGATGCTCTGATGCATAGAGCAGCATATGCAGAAACCTTGTACATTTTGGATTCAAACAGAAAGTCTGAGGCTGTCAAGTTGGTTGAAGAGTCAACAAATAACTTTGTGCCAAGGTAA 2406 0.4123 MGASLPPKEANLFKLIVKSYETKQYKKGLKAADAILKKFPDHGETLSMKGLTLNCMDRKSEAYVLVRQGLKNDLKSHVCWHVFGLLYRSDREYREAIKCYRNALKIDPDNIEILRDLSLLQAQMRDLSGFVETRQQLLTLKPNHRMNWIGFSVAHHLNSNASKAVEILEAYEGTLEDDYPPENERCEHGEMLLYKISLLEECGFLERALEELRKKESKIVDKLAYKEQEVALLVKLGRLEEGETLYQALLSMNPDNYRYYEGLQKCVGLYSENGPYSPDEIDRLDSLYQTLSQQYKWSSAVKRIPLDFLQGEKFREAADNYIRPLLTKGVPSLFSDLSSLYNHPGKADILEQLILELEHSIRTSAQYPGRVEKEPPSTLMWTLFLLAQHYDRRGQYEIALSKIDEAIEHTPTVIDLYSGKSRILKHAGDLAAAAAFADEARCMDLADRYVNSECVKRMLQADKVALAEKTAVLFTKDGDQHNNLHDMQCMWYELASGESYFRQGDLGRALKKFLAVEKHYADITEDQFDFHSYCLRKMTLRTYVEMLKFQDRLHSHVYFHKAAAGAIGCYIKLHDSPPKSTAEEDDDMSKLLPSQKKKLRQKQRKAEAKAKKEAEEKNEELSASGVSKSGKRHVKPADPDPHGEKLLQVEDPLSEAAKYLKLLQKNSPDSLETHLLAFELYIRKHKILLAFQAVKQLLRLDAEHPDSHRCLIKFFHKVGSMNAPVTDSEKLIWSVLEAERPTISQLHEKSLLEANNSFLEKHKDALMHRAAYAETLYILDSNRKSEAVKLVEESTNNFVPR* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2544 801 Pfam N-terminal acetyltransferase A, auxiliary subunit 187 696 IPR021183 -
Dod06g2544 801 Gene3D - 505 725 - -
Dod06g2544 801 MobiDBLite consensus disorder prediction 578 645 - -
Dod06g2544 801 SMART tpr_5 380 413 IPR019734 GO:0005515
Dod06g2544 801 SMART tpr_5 43 76 IPR019734 GO:0005515
Dod06g2544 801 SMART tpr_5 77 110 IPR019734 GO:0005515
Dod06g2544 801 PIRSF NAT_A 1 800 IPR021183 -
Dod06g2544 801 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 10 799 - -
Dod06g2544 801 Coils Coil 195 215 - -
Dod06g2544 801 PANTHER BNAC02G23120D PROTEIN 10 799 - -
Dod06g2544 801 SUPERFAMILY TPR-like 381 707 IPR011990 GO:0005515
Dod06g2544 801 Pfam TPR repeat 84 123 - -
Dod06g2544 801 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Dod06g2544 801 MobiDBLite consensus disorder prediction 606 622 - -
Dod06g2544 801 SUPERFAMILY TPR-like 20 440 IPR011990 GO:0005515
Dod06g2544 801 MobiDBLite consensus disorder prediction 578 594 - -
Dod06g2544 801 Coils Coil 596 624 - -
Dod06g2544 801 MobiDBLite consensus disorder prediction 631 645 - -
Dod06g2544 801 Gene3D - 2 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2544 Dod-Chr6 54558160 54572064 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2544 K20792 - gmx:100793968 1440.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2544 06 54558160 54572064 Dod06g2544 06 54558160 54572064 ECH
Dod10g2037 10 42157284 42158822 Dod06g2544 06 54558160 54572064 PCT