Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2518 ATGTCTATGTGGAGCAACCTTCCTTTTGATCTCTTAGCCAACATCTTCTCCTCTCTCTCCCCAGATTCCTTAGCTAGAGCAAGATCAGTTTGCAAGAATTGGCATGCGTGTGCCAAGTCTTATCCTATGACGCCAATAAGTACAAAGTGTGCAACACAGTGTAAGCCTCATCAAGCATGGTTTTTGGCCCTGCCAATTCGGAACCAAAGACCATGCTGCTATGCTCACAATCCAGTAATGAACAATTGGCATGAACTCTCCCTTGAGTTCTTGCCAGTTCCAGCAGTTAGACCGGTTGCACCAATTGGCAGCCTCCTCTTGTTGAGGGTCACCAATTCCACAACACTAAAACTTGTTCTATGCAACCCCTTTACAAGGCAGTTTAGATACCTTCCGAGGTTGAACATCTCAAGGACTAACCCTGCTGTTGGGGTTACCATTTTGGAGTCAAACCAAGATGTTAATTTTCCTTGCTTTAGAGTCTATGTTGCTGGTGGCATGTCTGAGGCAGCACAAGGTGGTGCTACCTATGAACCCACTTCAGAAATGTATGACTCAAGGCTTGAGAATTGGCAGATTTTAGGGTCCATGCCTGTGGAGCTTGCTGTTAGGCTTACAGTTTGGACACCAAATGAGAATGTGCACATCAAGGAGACATTGTACTGGATCACATCTGCTAGGGCCTACAGTGTGATGGGATTTGATATTAGCACAAATACATGGATCCAGCTTGGTGTGCCTATGGCAGAGAGGCTAGAATTTGCTACACTTGTTAGGAGGAATGAGGAATTGGCACTGGTTGGTGGCACATGTGATGGGGGTGCTTGCATTTGGGAGATGAATGATGGGGGCATATGGTGCCTAGCAGATAAGGTGCCAGCTGAATTGGGGTTGAGATTGTTGTCAGGGAAGAGAAATTGGGACAGTGTCAAGTGTGTAGGTAGTGAGGATGCTATTTGTTTGTATAGGGACCTTGGTTCTGGAATGGTAGTTTGTAAAGATGTTGGAAATAAGGGTAGATGGGAATGGCTTTGGATTGATGGGTGTGTTTATGTCAAAGGGAAACAGGTGAACAATTGCTCCATAAGAGGAACACTCCTCCACCCAACTCTTGCTTCCTCTCTTATCTTCTAA 1134 0.455 MSMWSNLPFDLLANIFSSLSPDSLARARSVCKNWHACAKSYPMTPISTKCATQCKPHQAWFLALPIRNQRPCCYAHNPVMNNWHELSLEFLPVPAVRPVAPIGSLLLLRVTNSTTLKLVLCNPFTRQFRYLPRLNISRTNPAVGVTILESNQDVNFPCFRVYVAGGMSEAAQGGATYEPTSEMYDSRLENWQILGSMPVELAVRLTVWTPNENVHIKETLYWITSARAYSVMGFDISTNTWIQLGVPMAERLEFATLVRRNEELALVGGTCDGGACIWEMNDGGIWCLADKVPAELGLRLLSGKRNWDSVKCVGSEDAICLYRDLGSGMVVCKDVGNKGRWEWLWIDGCVYVKGKQVNNCSIRGTLLHPTLASSLIF* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2518 377 SUPERFAMILY F-box domain 1 85 IPR036047 GO:0005515
Dod06g2518 377 Pfam F-box domain 4 40 IPR001810 GO:0005515
Dod06g2518 377 Gene3D - 65 359 IPR015915 GO:0005515
Dod06g2518 377 PANTHER F-BOX/KELCH-REPEAT PROTEIN 3 375 - -
Dod06g2518 377 SUPERFAMILY Kelch motif 69 274 IPR015915 GO:0005515
Dod06g2518 377 SMART fbox_2 7 46 IPR001810 GO:0005515
Dod06g2518 377 ProSiteProfiles F-box domain profile. 1 35 IPR001810 GO:0005515
Dod06g2518 377 PANTHER F-BOX DOMAIN, GALACTOSE OXIDASE, BETA-PROPELLER-RELATED 3 375 - -
Dod06g2518 377 Gene3D - 4 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2518 Dod-Chr6 54234117 54235567 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2518 - - adu:107463850 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2518 06 54234117 54235567 Dod06g2518 06 54234117 54235567 ECH