Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2499 ATGGCTTTGGCACGTTTGGCTTTGAGAAACTTGCAACAAAGGGTGGCCAATTCCTCATCACCCTTGATGGGACATGGTGGTGGTGTTGTGCAGAAGCAAAGGTGTGGCAATGAGTTGCTTATTAGAAGGTTTGCAATTGCAGCCAGTGATACTAATAAGGAGAAATCTCAAGGCAGTGAGGTTGCTGTCTCACCATCAGAAGGGAGAAGGTCTAGGCTGTTCCCTAGGAGGAGGAGCAGAAGATCATGGCCTTGGAGAAGTGATGACCGTGACTTCTCCCCTGCCCTTTATGAATTCTTTCCTTCAGGCCTTGGGAATGCACTGATGCAAGCATCTGAGAACATGAACAGGCTATTTGACAATATGAACTTGACACCATGGTCATTGAGTGGGCGTGTGAGGGAGAAGGATGACCACTACAAGCTGAGGTATGAGATGCCAGGGATTGCTAAAGAGGATGTGAAGATCACAATTGATGATGGGGTGTTAACAATAAAGGGTGAGCACAAAGAAGATAAAGAAGAAGGTGATGATGATGAATATTGGTCATCAAGTAGCTATGGTTACTATAACACTAGCTTGGTTTTGCCTGATGATGCTAAAGCTGATGACATTAAGGCTGAGTTGAAGGATGGTGTCCTAACTGTGACCATTCCTAGGACTGAGAAGCCTAAGAAAGATGTGAAGCAAGTCACTGTAGGTTAA 705 0.4511 MALARLALRNLQQRVANSSSPLMGHGGGVVQKQRCGNELLIRRFAIAASDTNKEKSQGSEVAVSPSEGRRSRLFPRRRSRRSWPWRSDDRDFSPALYEFFPSGLGNALMQASENMNRLFDNMNLTPWSLSGRVREKDDHYKLRYEMPGIAKEDVKITIDDGVLTIKGEHKEDKEEGDDDEYWSSSSYGYYNTSLVLPDDAKADDIKAELKDGVLTVTIPRTEKPKKDVKQVTVG* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2499 234 MobiDBLite consensus disorder prediction 51 75 - -
Dod06g2499 234 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 57 233 - -
Dod06g2499 234 SUPERFAMILY HSP20-like chaperones 119 232 IPR008978 -
Dod06g2499 234 CDD ACD_sHsps-like 133 220 - -
Dod06g2499 234 Pfam Hsp20/alpha crystallin family 133 233 IPR002068 -
Dod06g2499 234 Gene3D - 101 234 IPR008978 -
Dod06g2499 234 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 118 234 IPR002068 -
Dod06g2499 234 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 57 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2499 Dod-Chr6 54039691 54042249 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2499 K13993 - gmx:100787482 282.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2499 06 54039691 54042249 Dod06g2499 06 54039691 54042249 ECH