Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2485 ATGTCTGCTGCCGTGTGCGGAAGCAAGAGATCTTTCTTCGAAGAACTCCCTCCTTCGCCGCCACTCGCCAAGAAGCATCGTTGCTCTTCCCCGATTCGATTCCCTCCTCCTTCTCTCGTCGACCACCTTCGCCCTCTCTTCCCTCACATGGATGATTCGATTCTTGAGAGAGCACTCCAAGAATGCGGCAATGATCTAGATGCTGCCATCAAGAAGCTGAATGAGCTTTTCTTGGGAACTTCTGATGGAAATTCTGGAACTGCTGATGAATCACGGGTTGAGGTTAATGTGGATGCAGGTAAATTGGTAGATGATGGCCATGCTTCTGCTTCTGGGGATCAACCTGCTTTTAACAACCTTCCTGCAGATGGAGCAGAATGGGTTGACTTTTTTGTAAGAGAAATGATGGTTGCCACTAGTGTTGATGATGCTAGAGCCCGTGCTGGTAGATTGTTGGAGGTTCTAGAGAAATCAATAAGTGCTCGTGCAAGTGCTGAGGCAACAGATGTTCTTCAGAAGGAAAATTTGATGCTCAAGGAGCAAATTCAGGTGCTGATTAAGGAGAAAAATTCTTTTAAAAATGCTTTCCGAATCCAGCATGAACGTTTTTCTGATTATGAGGATAAGAACCAAGAGTTGCAGCATTTGAAGCAGTTGGCGGCTCAATATCAGGAGCAGATCAGAACGCTCGAGGTGAATAACTATGCTTTGGCAATGCATTTGAAGCAGGCTCAACAGAGCAACCCCTTTCCTGGGCGTTTCCCTCCTGATGTCTTCTAA 780 0.4628 MSAAVCGSKRSFFEELPPSPPLAKKHRCSSPIRFPPPSLVDHLRPLFPHMDDSILERALQECGNDLDAAIKKLNELFLGTSDGNSGTADESRVEVNVDAGKLVDDGHASASGDQPAFNNLPADGAEWVDFFVREMMVATSVDDARARAGRLLEVLEKSISARASAEATDVLQKENLMLKEQIQVLIKEKNSFKNAFRIQHERFSDYEDKNQELQHLKQLAAQYQEQIRTLEVNNYALAMHLKQAQQSNPFPGRFPPDVF* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2485 259 CDD CUE 38 73 - -
Dod06g2485 259 Gene3D - 37 85 - -
Dod06g2485 259 ProSiteProfiles CUE domain profile. 35 78 IPR003892 GO:0043130
Dod06g2485 259 SUPERFAMILY UBA-like 38 80 IPR009060 GO:0005515
Dod06g2485 259 Pfam CUE domain 38 75 IPR003892 GO:0043130
Dod06g2485 259 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 259 - -
Dod06g2485 259 Coils Coil 206 233 - -
Dod06g2485 259 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2485 Dod-Chr6 53841207 53844183 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2485 - - gmx:100813137 434.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2485 06 53841207 53844183 Dod06g2485 06 53841207 53844183 ECH
Dod10g2108 10 42972202 42974473 Dod06g2485 06 53841207 53844183 PCT