Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2479 ATGGCCCCAAGGTCAGCGAAAGGGAAATCAAATAAAGCTAAGGCTGAGAAGAAGAAAAAGGAAGACAAAGCAGCAGCGCCCTCTCTTGTTGACATAACTGTTGTCACTCCATATGATTCACAAATTGTACTGAAGGGTATCTCTACTGATAAGATACTTGATGTGAGAAGGCTATTGGCTGTGAAAGTGGAGACATGCCATTTTAGCAACTACTCTTTATCTCATGAGGTTAAAGGTCAGAGATTACATGACAGAGTGGAAGTTGTTACCCTAAAGCCATGTCTTCTAAGAATGGTTGAAGAGGATTACACAGAGGAGGCCCAGGCTGTTGCGCACGTGCGGAGGCTCTTGGACATCGTGGCCTGCACAACGAGGTTCGGGAAGCCCAAACGAGGCCTGTTAAGCCCAGATTCTAAGCCCAGGAAGAATGGGAAGGCCCAAAGTCAGAAGAGCCCACCTGCAACGCCGAATGGAGAAACGCGGGTCGGGTCACCGCCGTCGGATCGGGTCGTATCGCCGATATCGGATAGCGTGGGAATGGTGGCGATTCACCCAACGCCGAAGCTCTCAGATTTCTACGAGTTCTTCTCTTTCTCTCACCTCTCTCCTCCAATTCTTCATTTGAAGAGATGTGAACTGAAGAGTGAAGATGATAGTAAAGGAGATTACTTTCAGCTTCAGGTTAAAATCTGCAACGGCAAGGTAATAGATGTGGTTGCTTCAGAGAAAGGGTTTTACACTGTAGGAAAGCAGTCTCTGCAATGTTACACTCTGGTTGATCTTCTGCAACAGCTCAGCAGAGGTTTTGCTAATGCATATGGATTGTTGATGAAAGCCTTTTCGGAACATAATAAGTTTGGCAATCTTCCATATGGATTCCGTGCAAATACATGGCTTGTCCCTCCTTCTATCGCTGAGTCTCCATCTAATTTTCCTGCCCTACCTGTTGAGGATGAAAATTTGGGTGGTAATGGCGGTGGCCAAGGTAGAAATGGTGAATTTGAACGTAGGCAATGGGCTTCAGATTTTGCGATATTGGCTTCCCTTCCTTGCAAAACTGAGGAGGAGAGGGTGGCAGTTGCGGCTGTACAGCACATCATTGAATCCAAGGCAAATACGAAGAATGAATTGAATTCTTCTCCAGGTTCATTTCTACATGAAGATCGTGTAGGAGACTTATCCATTGTCGTCAAACAGGATATCCGTAATGGAAATAGAGAGTATGATTCTATTTCTGATGAATCTAGTCTGCATAAGGAGGATACTCAGAAGAATTTACTCAAAGGGTTGACTGCAGATGAAAGTGTAATTGTACATGACACATCTTCATTGACTGCTGTTGTTGTACATCATTGTGGATATACTGCAACAGTGAGAGTTGTGGGTGCATTGAACATGAGAAAGCCTAAAGTTCATGATATTCAAATAGAAGATCAACCAGATGGAGGGGCTAATGCTCTTAACATTAACAGCTTGAGGCTACTGCTTCACAAATCTGTAGATGAACCCTCAGAAGGAACTGTATCATCTCTGCCAAATTCAGATGACTTAGATGGCTATACACATCTTGTCCGGAAGGTGGTTCAAGAATGCTTCGAGAAGTTGAAGGAGGAACAAGGTGTTTCAGAAAGGTCTATCCGATGGGAACTTGGTTCCTGTTGGATGCAACATCTGCAAAAACAAGAAAACCCAACAGATGATAGTTCCGAAAACTTAGACGATGGCAACAATGCTGAGCAAGCTGTTAAAGGTCTTGGAAAGCAATTTAAACTTTTAAAGAAGAGGGAAAAGAAACCAAGTAATCTAGATGGTACAGATTCTAGTGAACAAAATGATTCTAGACCTGGAAACGTGAATGGGCGGACTGATAAACTTGAGCCATGCTATGATGAGTTAAGTACCTCTTCTGAGTTGGAGAAAGTACTTTCTAAAGATGCATTTTTGCGTCTCAAAGAATCTGGCACTGATCTTCATTTAAAGTCGGTGAATGAGCTTATCAACATGGCACACAAGTTTTATGATGAAATTGCCTTGCCAAAGCTGGTTACAGACTTTGGATCACTTGAACTTTCTCCTGTTGATGGTCGTACGCTAACTGATTTTATGCATTTAAGAGGATTACAGATGCGATCTTTGGGTGAAGTGGTTAAACTTGCAGAGAATCTTCCACACATACAATCCCTTTGTATTCATGAGATGATTACTCGAGCATTTAAGCATCTACTTAAAGCCATAATTGCCTATGTTAACAATGTAGCAGACTTATCTGCTGTCATTGCATCAACTCTGAATTTCTTACTTGGAGGGTCTCAAACGGAAGATACTGACAAAACTTTGGAGGATGACCACCATCTCAGATTTCAGTGGTTACGTATGTTTTTGTCCAAAAGATTTGGATGGACATTAAACAATGAATTTCAGCATTTGAGGAAGTTGTCAATTATCAGAGGGCTCTCCCACAAGGTTGGACTGGAACTGTTACCAAGAGATTATGACATGGATTCCCCCAAACCCTTTCGGAAATATGATATTATTAGCCTGGTTCCTGTTTGCAAGCATGTAGGGTGCTCCTCAGTTGATGGACGTAATTTATTGGAATCTTCTAAAATTGCTCTTGATAAAGGAAAGCTTGAGGATGCTGTAAATTATGGAACAAAGGCATTAGCAAAGATGATGACTGTTTGCGGGCCTTATCATCGAACTACTGCAAGTGCATACAGTCTTCTAGCCGTGGTTCTCTACCACACTGGAGACTTTAACCAGGCAACCATATATCAGCAAAAGGCATTGGATATAAATGAGAGGGAGCTTGGGCTTGATCATCCTGACACAATGAAAAGCTATGGGGATCTTTCTGTCTTCTATTATCGTTTGCAGCATATTGAGCTGGCTCTGAAGTATGTCAACCGTGCTCTATTCCTTCTTCATTTTACATGTGGGCTGTCCCATCCAAACACAGCTGCAACATATATAAATGTGGCTATGATGGAAGAGGGCTTGGGAAACGTTCATGTGGCACTCAGATACTTGCATGAAGCTCTTAAATGCAACAAAAGATTGTTAGGAGCTGATCATATACAGACTGCTGCTAGCTATCATGCCATAGCTATAGCCCTTTCATTAATGGAAGCGTATTCTCTGAGTGTTCAACATGAGCAAACTACGCTTAAGATACTTCAAGCAAAGCTTAAATCTGAAGATCTTCGTATACAGGATGCTGCTGCATGGCTTGAATATTTTGAATCAAAAGCCATAGAGCAGCAAGAAGCAGCTAAAAATGGAACTCCAAAGCCAGATGCATCCATTGCTAGTAAAGGTCACCTTAGTGTGTCAGATCTCCTGGATTTTATAAGTCCTGATCAAGACTCAAAAGGAAATGATGCTCAGAGGAAACAGCGACGTGCAAAGACACTCCCAGCAAGTGATACCCGTCAAGATCATGATTATGAACTAGCTGATGAGGGCATTCTTTTTGATGACTCAAAAGATGCTACAAGTATGGTACAAGGTAACACAGAAGAAACAAATGGAACACTTGATTCCAAAGAACTAAAAGAAAATGCTGGTTTTTACAAGCCAGTGACAAGTGAAGTTGTTGAGGAGATATCGTCTGATGAAGGTTGGCAAGAAGCCAACTCAAAAGGGCGGTCAGGAAATCCTGCTAACCGCAAGTTTGGAAGCAGACGAAGACCTCTTTTATCAAAGCTCAGCATTAATGGTTCTGATAATTCCAATTTTCGAGAAGGCAGTCACAGGAATGACATTGCTTCACCACCACAAAAGGGAGCCTCAAAAGTAATTTCAGCTATGTTATCTCCGTCGAGACAATCCAAAGTTCGAAACCTTAACATGAACGAGGATTCTGTCATGAAAGCTTCTGCATCCAAAATTTCTTCTACTCCAGCATCTTTAAGTTCTTTGGCTTCCAAGTCTATATCTTACAAAGAAGTGGCTCTGGCACCACCAGGTACAGTTTTAAAGCCATTGTTGGAGAAAGCTGAGATGGACAATGTAAAGACTGAAATTGATATGTCCAGCAGTTCAACTGTGATATCATTAAATGAAGGTACTTGCCAAAGTTCCACTGTTGATACAGTTCCGGAGCATGATGAAACTGAGGGAACTCAAGAAATTGAACCTGAACAAGAAAATTGTTCCTCAGAACCTGAGAAGGTTTCTCTAGCTCCTGATCAGGTGAAACCTGCAGAAACAAATGTAAGTAAGCTTTCAGCTTCAGCCAAACCATTCTCTCCAGGAACATTGTCCATGGCTCACCATCAATTAAGTTCAGCTTCCATGACAAGCATATATGATGCAAATATTAGTCAAGGCATGCTTGTGGAGCCTGTGCTTCCTCCGGCTGCTGCGAGGGTCCCATGTGGACCGAGATCACCTCTATACTATAGAACCAACTACGCGTTCCGCATGAAACACGGTTTCACAAAGTCCCATGCCCCTAGAAGTGCTCCTAGAATCATGAATCCTCATGCACCCGAGTTTGTTCCCAGAAGTGCTTCTCAAATAGAAGCCAGTGATGTTTCTGAAAAAAATAAGCCAGGTGAAGAATTTGTTGAGGTCAAAGATAGTTCTCCAAAAAACAGCATCTCTGAATCGGAGAAGTCAGAGATAGCAAGGCAGATATTGCTCAGTTTTCTTGTGAAGTCCGTTCGGCAAAATATCGATTCAGTTGATGAATCTAAAGTTAGTGAAGGAAAGCATGACAGTTCAGAAAATTCTTCAGATGCAATAGCCAAAGACAGTGCTATCATTAAAATTATGTATGGGAATGAAGAGAATGATAAGATGGATCCTAATTCAAGCGATGTTGAAGATCAAGAAAACGTGGATGTAAGCGGGAAAGAGAATGGAGATGGTGAAGGCTTTATAGTTGTCACAAAGAGGAGAAAAAGCAGGCAGAAGATCACAAATGGAGTATCTGGATTGCATAACCAGCAGTCCTTATGTGCTTCAGTTCGTTGA 4980 0.4205 MAPRSAKGKSNKAKAEKKKKEDKAAAPSLVDITVVTPYDSQIVLKGISTDKILDVRRLLAVKVETCHFSNYSLSHEVKGQRLHDRVEVVTLKPCLLRMVEEDYTEEAQAVAHVRRLLDIVACTTRFGKPKRGLLSPDSKPRKNGKAQSQKSPPATPNGETRVGSPPSDRVVSPISDSVGMVAIHPTPKLSDFYEFFSFSHLSPPILHLKRCELKSEDDSKGDYFQLQVKICNGKVIDVVASEKGFYTVGKQSLQCYTLVDLLQQLSRGFANAYGLLMKAFSEHNKFGNLPYGFRANTWLVPPSIAESPSNFPALPVEDENLGGNGGGQGRNGEFERRQWASDFAILASLPCKTEEERVAVAAVQHIIESKANTKNELNSSPGSFLHEDRVGDLSIVVKQDIRNGNREYDSISDESSLHKEDTQKNLLKGLTADESVIVHDTSSLTAVVVHHCGYTATVRVVGALNMRKPKVHDIQIEDQPDGGANALNINSLRLLLHKSVDEPSEGTVSSLPNSDDLDGYTHLVRKVVQECFEKLKEEQGVSERSIRWELGSCWMQHLQKQENPTDDSSENLDDGNNAEQAVKGLGKQFKLLKKREKKPSNLDGTDSSEQNDSRPGNVNGRTDKLEPCYDELSTSSELEKVLSKDAFLRLKESGTDLHLKSVNELINMAHKFYDEIALPKLVTDFGSLELSPVDGRTLTDFMHLRGLQMRSLGEVVKLAENLPHIQSLCIHEMITRAFKHLLKAIIAYVNNVADLSAVIASTLNFLLGGSQTEDTDKTLEDDHHLRFQWLRMFLSKRFGWTLNNEFQHLRKLSIIRGLSHKVGLELLPRDYDMDSPKPFRKYDIISLVPVCKHVGCSSVDGRNLLESSKIALDKGKLEDAVNYGTKALAKMMTVCGPYHRTTASAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGLGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLKILQAKLKSEDLRIQDAAAWLEYFESKAIEQQEAAKNGTPKPDASIASKGHLSVSDLLDFISPDQDSKGNDAQRKQRRAKTLPASDTRQDHDYELADEGILFDDSKDATSMVQGNTEETNGTLDSKELKENAGFYKPVTSEVVEEISSDEGWQEANSKGRSGNPANRKFGSRRRPLLSKLSINGSDNSNFREGSHRNDIASPPQKGASKVISAMLSPSRQSKVRNLNMNEDSVMKASASKISSTPASLSSLASKSISYKEVALAPPGTVLKPLLEKAEMDNVKTEIDMSSSSTVISLNEGTCQSSTVDTVPEHDETEGTQEIEPEQENCSSEPEKVSLAPDQVKPAETNVSKLSASAKPFSPGTLSMAHHQLSSASMTSIYDANISQGMLVEPVLPPAAARVPCGPRSPLYYRTNYAFRMKHGFTKSHAPRSAPRIMNPHAPEFVPRSASQIEASDVSEKNKPGEEFVEVKDSSPKNSISESEKSEIARQILLSFLVKSVRQNIDSVDESKVSEGKHDSSENSSDAIAKDSAIIKIMYGNEENDKMDPNSSDVEDQENVDVSGKENGDGEGFIVVTKRRKSRQKITNGVSGLHNQQSLCASVR* 1660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2479 1659 CDD CLU-central 692 833 IPR033646 -
Dod06g2479 1659 Pfam Tetratricopeptide repeat 902 972 - -
Dod06g2479 1659 Pfam Tetratricopeptide repeat 986 1060 - -
Dod06g2479 1659 MobiDBLite consensus disorder prediction 1124 1146 - -
Dod06g2479 1659 Gene3D Tetratricopeptide repeat domain 862 1109 IPR011990 GO:0005515
Dod06g2479 1659 ProSiteProfiles TPR repeat profile. 903 936 IPR019734 GO:0005515
Dod06g2479 1659 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 1656 - -
Dod06g2479 1659 MobiDBLite consensus disorder prediction 1200 1264 - -
Dod06g2479 1659 MobiDBLite consensus disorder prediction 604 618 - -
Dod06g2479 1659 Pfam Translation initiation factor eIF3 subunit 135 690 832 IPR033646 -
Dod06g2479 1659 MobiDBLite consensus disorder prediction 1206 1220 - -
Dod06g2479 1659 MobiDBLite consensus disorder prediction 1119 1146 - -
Dod06g2479 1659 MobiDBLite consensus disorder prediction 596 629 - -
Dod06g2479 1659 MobiDBLite consensus disorder prediction 1514 1539 - -
Dod06g2479 1659 MobiDBLite consensus disorder prediction 1597 1659 - -
Dod06g2479 1659 MobiDBLite consensus disorder prediction 1597 1620 - -
Dod06g2479 1659 Pfam Mitochondrial function, CLU-N-term 49 120 IPR028275 -
Dod06g2479 1659 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 1 1656 IPR027523 GO:0006996
Dod06g2479 1659 MobiDBLite consensus disorder prediction 130 169 - -
Dod06g2479 1659 SMART tpr_5 945 978 IPR019734 GO:0005515
Dod06g2479 1659 SMART tpr_5 987 1020 IPR019734 GO:0005515
Dod06g2479 1659 SMART tpr_5 903 936 IPR019734 GO:0005515
Dod06g2479 1659 MobiDBLite consensus disorder prediction 1562 1584 - -
Dod06g2479 1659 ProSiteProfiles Clueless (Clu) domain profile. 317 569 IPR025697 -
Dod06g2479 1659 SUPERFAMILY TPR-like 940 1058 IPR011990 GO:0005515
Dod06g2479 1659 SUPERFAMILY TPR-like 869 972 IPR011990 GO:0005515
Dod06g2479 1659 MobiDBLite consensus disorder prediction 1562 1580 - -
Dod06g2479 1659 MobiDBLite consensus disorder prediction 1 24 - -
Dod06g2479 1659 MobiDBLite consensus disorder prediction 1641 1659 - -
Dod06g2479 1659 MobiDBLite consensus disorder prediction 1503 1539 - -
Dod06g2479 1659 MobiDBLite consensus disorder prediction 1356 1398 - -
Dod06g2479 1659 MobiDBLite consensus disorder prediction 141 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2479 Dod-Chr6 53772634 53785179 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2479 K03255 - gmx:100784276 2440.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2479 06 53772634 53785179 Dod06g2479 06 53772634 53785179 ECH