Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2473 ATGGGGGGAGCGTGTTCTAGGAAGCAAGAGCAGGATCATGATGATAGTCCCTGTAGAGGACTTTCACGAAGATTTTGCAAAAATGGCAGTTTGAAATGGTGGACATCCTCCTTTGCTTACCCTTCTGTAGATGTTTATTTACGAAGAGGAGACTGTCCATCCCTGTTGGACTTGTGCATCCAGAAAATAAGTGAGGATATTGATAGTTATCATACATTTTCTATGCTGCCTCGGGACATAACTCAGCAAATTTTTAATAAATTGGTTTGTTCCCGACGTCTAACTTGTGTTTCCCTTGAAGCTTTTCGAGATTGTGCTCTCCAGGATCTTGAATTGGGTGAATATGCTGGTGTTAATGATTCTTGGATGGATGTCATCTCATCACAGGGCTCATCTTTACTTTCTGTAGATCTTTCTGGGTCTGATGTCACTGATTTTGGGCTGACTTATCTTAAAGATTGTGAAAATCTCCTCTCCTTGAATCTAAATTACTGTGACCAAATTTCAGACAATGGACTTGAGTGCATCAGTGGTCTGTCAAACTTGACAAGTTTGAGTTTTAGAAGAAACAATTCAATATCTGCTCAAGGAATGAGTGCCTTTTCTGGTTTAGTTAATTTGGTCAAGTTGGATTTGGAGAGATGTCCTGGAATTCATGGAGGCCTAGTTCATCTTCAAGGTTTAACCAAGTTGGAATCACTCAATATAAAGTGGTGTAATTGCATAACAGATGCTGATATGAAGCCTCTTTCAGAGCTTGAATGCTTGAAGAGTTTAGAGATTTCTTGCAGTAAAGTCACTGATTTTGGCATCAGCTTTCTAAGAGGATTACGAAAACTTGCTCTGTTAAATTTGGAAGGATGCCTTGTAACAGCTGCATGCTTGGATTCTCTAGCAGAGCTTCCTGCCCTTTCAAACTTGAATCTTAATAGATGCAGTCTTTCCGATGATGGATGTGAAAAGTTTTCACGATTGATAAATTTGAAAGTACTCAACTTGGGATTTAATGACATAACCGGTGCATGTTTAGCACACTTGAAAGGATTGACAAAGTTGGAGAGCTTGAACCTTGATTCATGTAGGATTGGTGATGAAGGGTTGGTCAACTTGGCAGGCCATAGGCAATTGAAGTGCTTGGAATTGTCTGATACAGAAGTTGGAGACAATGGGCTACACCATTTATCAGGATTGTTTAGTCTGGAGAAAATAAATCTGTCATTCACCGTGGTTAGTGATAGTGGATTGAAGAAGTTGTGTGGACTCTCATCCCTGAAGTCACTTAATTTGGATGCTTACCAAATTACTGATGCTGGACTGGCAGCTCTTACATGTTTGACAGGGCTTACCGACCTGGATTTGTTTGGTGCTCGAATCTCAGATCATGGAACCAACTATTTGAAGAAATTCAAGAACCTGAGGTCCTTGGAAATATGTGGTGGAGGACTGACTGATGCTGGCATGAAGAATATCAAGGAGCTTTCTTCTCTCATGTGCTTAAATTTATCACAAAACTGCAACCTTACAGACGAAACCCTGGAGTCGATTTCTGGGCTTACTGGGTTGATTTCTTTGAATGTTTCAAATTCTCGCATCACCAATGCTGGACTGCACCATTTGAAAACACTCAAGAATTTGAGGTCTCTGACATTGGAGTCCTGCAAGGTAACAGCAAATGACATTAAGAAACTTAAATCGATACACCTCCCCAATCTGGTTAGTTTTCGCCCAAACAGCTAG 1737 0.4047 MGGACSRKQEQDHDDSPCRGLSRRFCKNGSLKWWTSSFAYPSVDVYLRRGDCPSLLDLCIQKISEDIDSYHTFSMLPRDITQQIFNKLVCSRRLTCVSLEAFRDCALQDLELGEYAGVNDSWMDVISSQGSSLLSVDLSGSDVTDFGLTYLKDCENLLSLNLNYCDQISDNGLECISGLSNLTSLSFRRNNSISAQGMSAFSGLVNLVKLDLERCPGIHGGLVHLQGLTKLESLNIKWCNCITDADMKPLSELECLKSLEISCSKVTDFGISFLRGLRKLALLNLEGCLVTAACLDSLAELPALSNLNLNRCSLSDDGCEKFSRLINLKVLNLGFNDITGACLAHLKGLTKLESLNLDSCRIGDEGLVNLAGHRQLKCLELSDTEVGDNGLHHLSGLFSLEKINLSFTVVSDSGLKKLCGLSSLKSLNLDAYQITDAGLAALTCLTGLTDLDLFGARISDHGTNYLKKFKNLRSLEICGGGLTDAGMKNIKELSSLMCLNLSQNCNLTDETLESISGLTGLISLNVSNSRITNAGLHHLKTLKNLRSLTLESCKVTANDIKKLKSIHLPNLVSFRPNS* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2473 578 SUPERFAMILY RNI-like 419 571 - -
Dod06g2473 578 PANTHER UNCHARACTERIZED 2 534 - -
Dod06g2473 578 Pfam Leucine rich repeat 302 362 IPR001611 GO:0005515
Dod06g2473 578 Pfam Leucine rich repeat 471 531 IPR001611 GO:0005515
Dod06g2473 578 Gene3D Ribonuclease Inhibitor 292 391 IPR032675 -
Dod06g2473 578 SMART LRR_CC_2 349 373 IPR006553 -
Dod06g2473 578 SMART LRR_CC_2 542 566 IPR006553 -
Dod06g2473 578 SMART LRR_CC_2 493 518 IPR006553 -
Dod06g2473 578 SMART LRR_CC_2 301 325 IPR006553 -
Dod06g2473 578 SMART LRR_CC_2 228 253 IPR006553 -
Dod06g2473 578 SMART LRR_CC_2 397 421 IPR006553 -
Dod06g2473 578 SMART LRR_CC_2 154 179 IPR006553 -
Dod06g2473 578 SUPERFAMILY RNI-like 127 461 - -
Dod06g2473 578 Gene3D Ribonuclease Inhibitor 395 479 IPR032675 -
Dod06g2473 578 Gene3D Ribonuclease Inhibitor 88 219 IPR032675 -
Dod06g2473 578 Gene3D Ribonuclease Inhibitor 480 572 IPR032675 -
Dod06g2473 578 Gene3D Ribonuclease Inhibitor 220 291 IPR032675 -
Dod06g2473 578 PANTHER LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED RECEPTOR 4-LIKE 2 534 - -
Dod06g2473 578 Pfam Leucine Rich repeat 154 177 IPR001611 GO:0005515
Dod06g2473 578 Pfam Leucine Rich repeat 180 202 IPR001611 GO:0005515
Dod06g2473 578 Pfam Leucine Rich repeat 376 394 IPR001611 GO:0005515
Dod06g2473 578 Pfam Leucine Rich repeat 399 419 IPR001611 GO:0005515
Dod06g2473 578 Pfam Leucine Rich repeat 229 251 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2473 Dod-Chr6 53628019 53640138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2473 121 427 Receptor kinase-like Gene Family AT5G51350 29.430 1.38e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2473 - - gmx:100800666 952.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2473 06 53628019 53640138 Dod06g2473 06 53628019 53640138 ECH