Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2452 ATGCCAGTTAATTATGTAGATTTTCCTGATGAATGCTGGGAATTGGTCTTCGGATTCCTTGGCCATGGCCGTGACTTGGAGTCTGTATCTATGGTCTGCAAGCAGTTCAAATCCATTACAAGCCGGCTTCAATTTTCACTCACAATATTTGATTCAACAATTGTACTCCTTCCTAAGCTATTCTTGAGGTTTTCTAGGCTCAAAATCTTAGACCTCAGTCACTTCAGTGGCAACTTGGGAAAAGGCCTTCTTCATCAGATTTCACAATCTGGGTTGGACCTTGATTTGCTTAATCTTTCCAATCAAAGAACACTTCCTGTTGATGGGTTGCGCAAGCTCGGTTCAAAGATGAAAAACCTGAGGGTCTTGATCTGCTCAAACATTGGCACTCTGCAAGATAGCCATCTGGTGGTCATGGCCTATTGTTTCCCATTGCTTCAAGAGCTTGACATTAGCTTCCCGTTGGATTCTCAAGCATCAGATTTTGGGATATTGAAGCTGTCTTCCATGCTTGAGAACCTGCGCAAGATTAACCTTTCTGGTAATTACTTGATCACTGATCAATCACTTTTCTCACTATGCCAAAACTGTATGTCAATGGAAGAGATTTCATTCTTCACTTGTTTCAAAATAACACAACTAGGCATTGCTTCTGCAATCCGTGTAAGACCAAGTTTGACTTCCATATCCTTTAACATTGAGAAGAAAAGAATTCATGGACCTGGCTTGGCACCTATGCCAATTAAATTGGATTTGATCGATTCACTCAAGAATTTGAGGAGGAACTGTCCATTACTCATTGCGATCAAAATGGAGAGAACGTATCTTGGGGTAGAAGGGCAAGAAGAAGAGTCTTTGCTGGATCCTGTTGCCAACCCTCAAGTGAAGAGTCTCTATCTGGGTGACAATGTTTTACTTGGTGATGCAAGTTTAATAAAACTTGCTTCCATTTGCCCCAGTTTACAGCTTCTTGACTTCAACTCTTGTGGGAGTATATCTGGAGAATGCATTGCTGAGGTTTTAAAGAGATGTTGTGAGATAAGGCATTTGAACTTAGCATATACAGGAGTGAAGCTTTTTGAGATAGACTTTGAGGTTTCACAATTGAAGGTGCTGAACTTGTCAGGGTCAAGAATTGATGATGAAACACTCTCAATAATCTCAAGGAGGTGTTGTGGACTTGTACTCTTGGAGGTCCAAAGTTGCAATGATGTTACAGAAAAAGGGGTGAGGGAAATAGTAGAAAACTGCACAGCATTGAGAGAGTTAAATTTGAAGAATTGTGGTTTTGTGTCTGATGATTTTGTTGCTTCCTTGGCGTTTTCAAGGCCAACACTGAGGAAAATAATCACACCCTCTGGTGTTGGTGTTAATTACTGA 1380 0.4072 MPVNYVDFPDECWELVFGFLGHGRDLESVSMVCKQFKSITSRLQFSLTIFDSTIVLLPKLFLRFSRLKILDLSHFSGNLGKGLLHQISQSGLDLDLLNLSNQRTLPVDGLRKLGSKMKNLRVLICSNIGTLQDSHLVVMAYCFPLLQELDISFPLDSQASDFGILKLSSMLENLRKINLSGNYLITDQSLFSLCQNCMSMEEISFFTCFKITQLGIASAIRVRPSLTSISFNIEKKRIHGPGLAPMPIKLDLIDSLKNLRRNCPLLIAIKMERTYLGVEGQEEESLLDPVANPQVKSLYLGDNVLLGDASLIKLASICPSLQLLDFNSCGSISGECIAEVLKRCCEIRHLNLAYTGVKLFEIDFEVSQLKVLNLSGSRIDDETLSIISRRCCGLVLLEVQSCNDVTEKGVREIVENCTALRELNLKNCGFVSDDFVASLAFSRPTLRKIITPSGVGVNY* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2452 459 Gene3D Ribonuclease Inhibitor 248 360 IPR032675 -
Dod06g2452 459 Gene3D Ribonuclease Inhibitor 361 451 IPR032675 -
Dod06g2452 459 Gene3D Ribonuclease Inhibitor 2 240 IPR032675 -
Dod06g2452 459 SUPERFAMILY RNI-like 49 440 - -
Dod06g2452 459 PANTHER UNCHARACTERIZED 7 269 - -
Dod06g2452 459 PANTHER UNCHARACTERIZED 225 443 - -
Dod06g2452 459 SMART LRR_CC_2 171 196 IPR006553 -
Dod06g2452 459 SMART LRR_CC_2 292 317 IPR006553 -
Dod06g2452 459 SMART LRR_CC_2 318 343 IPR006553 -
Dod06g2452 459 SMART LRR_CC_2 64 90 IPR006553 -
Dod06g2452 459 SMART LRR_CC_2 391 416 IPR006553 -
Dod06g2452 459 SMART LRR_CC_2 417 442 IPR006553 -
Dod06g2452 459 SMART LRR_CC_2 366 390 IPR006553 -
Dod06g2452 459 SUPERFAMILY F-box domain 6 42 IPR036047 GO:0005515
Dod06g2452 459 PANTHER NODULIN-LIKE PROTEIN 7 269 - -
Dod06g2452 459 PANTHER NODULIN-LIKE PROTEIN 225 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2452 Dod-Chr6 53240740 53242758 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2452 K10268 - gmx:100820070 428.328