Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2205 ATGCAGCTAGCCATTCTCACATTCCCATTCAAAAACCCCCCAAAGATTCTCACCACACCACCAACAACCAAGATGCTTCACATTCTCTTCCTCCTCCCTCTTCTCTTGTCCACTTCTTCCCATGCTTCTGTCCAAGACTTCTGTGTGGCAGACCTCGAGGCTCAAGATGGCCCTGCAGGCTATCCCTGCAAGCCAGCTGCCAATGCGACTGCAGATGACTTTGTGTACACTGGCTTATCTGAACCTGGAAAAATCCTTCCCATAATCAAAGCTGCTGTGACCCCTGCATTTGTTGCTCAATTCCCAGGTGTTAATGGTCTTGGCCTCTCTGCATTAAGGTTAGACCTTGAGGCTGGTGGTGTCATCCCATTGCACACTCACCCTGGTGCCTCTGAGCTTCTAATTGTGAAGCAAGGTCAGATCACTGCTGGGTTTATATCATCAGCAAACCAAGTTTTTGTGAAGACACTGAAGAAAGGAGAACTTATGCTTTTCCCACAAGGGTTGTTGCATTTTCAAATTGCTGCTGGTATGAAAGGTGCTGTTGCCTTTGCTGTGTTCAGTAGCGCAAACCCGGGGCTTCAAATCCTTGATTTTGCATTGTTTGCCAGCAACTTCGCCACTGAATTGGTGTCACAGACTACTTTCCTTGACCCTGCCGAAATTAAGAAGCTCAAGGGTGTTCTTGGTGGCAGTGGCTAG 702 0.4801 MQLAILTFPFKNPPKILTTPPTTKMLHILFLLPLLLSTSSHASVQDFCVADLEAQDGPAGYPCKPAANATADDFVYTGLSEPGKILPIIKAAVTPAFVAQFPGVNGLGLSALRLDLEAGGVIPLHTHPGASELLIVKQGQITAGFISSANQVFVKTLKKGELMLFPQGLLHFQIAAGMKGAVAFAVFSSANPGLQILDFALFASNFATELVSQTTFLDPAEIKKLKGVLGGSG* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2205 233 SUPERFAMILY RmlC-like cupins 42 226 IPR011051 -
Dod06g2205 233 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 29 229 - -
Dod06g2205 233 Pfam Cupin 79 222 IPR006045 -
Dod06g2205 233 PRINTS Germin signature 155 175 IPR001929 GO:0030145
Dod06g2205 233 PRINTS Germin signature 125 145 IPR001929 GO:0030145
Dod06g2205 233 PRINTS Germin signature 188 203 IPR001929 GO:0030145
Dod06g2205 233 SMART Cupin_1_3 77 223 IPR006045 -
Dod06g2205 233 ProSitePatterns Germin family signature. 120 133 IPR019780 GO:0030145
Dod06g2205 233 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 1 29 229 - -
Dod06g2205 233 CDD cupin_OxOx 40 229 - -
Dod06g2205 233 Gene3D Jelly Rolls 39 232 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2205 Dod-Chr6 47272109 47273202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2205 41 233 Miscellaneous Gene Families AT1G72610 66.321 1.87e-87 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2205 - - gmx:100816355 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2205 06 47272109 47273202 Dod06g2205 06 47272109 47273202 ECH