Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2181 ATGACGTCTTCTTCTGGAGCTTCACATATAAAATATGTTGTATTCGTCGGTCTCTTACTTATTTCAAATATTAGGGGCATGATGGCGAATACGATGTCAGACAATGCTTCTTCCTATCCGGTGGAAATTTTTACTGATGCTTCTTCTTCCTATCCAGTTGAAACTTTTGCCTTCACTGCTCCACATATAAAATATGATGTTTTTGTTAGCTTTAGGAGCACCGACATCCGCCAAGGTTTCCTGAGCCATTTGATTAAGGCATTATCTCAAAAGCAAATTTTTGCCTTTGTAGATGATAAACTTGAGAGGGGAGATGAAATATCAGAAGCACTTCTGAGAGCAATTGAAAGGTCACTGATTTCATTGATCATATTTTCACAAGACTATGCTTCTTCATCCTGGTGTTTGGAAGAACTTGTAAAAATAGTTGAGTGCAGGGAAAAAGACGGACAGACTGTAATACCTGTTTTCTATGAAATAGATCCATCAGAAGTGCGGAATCAAAAGGGAACTTTTGCAAATGCATTTTCTGAACATGAGAAAAAGTATGATAACACCAAGGTGCAAATCTGGCGAAGTGCTTTGAGAGATTCTGCTAATTTGTCTGGATTTCATTCTTCAAACTTTAGGTATGTTTCCTCTCGCTAA 648 0.3765 MTSSSGASHIKYVVFVGLLLISNIRGMMANTMSDNASSYPVEIFTDASSSYPVETFAFTAPHIKYDVFVSFRSTDIRQGFLSHLIKALSQKQIFAFVDDKLERGDEISEALLRAIERSLISLIIFSQDYASSSWCLEELVKIVECREKDGQTVIPVFYEIDPSEVRNQKGTFANAFSEHEKKYDNTKVQIWRSALRDSANLSGFHSSNFRYVSSR* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2181 215 SUPERFAMILY Toll/Interleukin receptor TIR domain 61 204 IPR035897 -
Dod06g2181 215 Pfam TIR domain 64 201 IPR000157 GO:0007165
Dod06g2181 215 PANTHER TMV RESISTANCE PROTEIN N-LIKE 49 209 - -
Dod06g2181 215 PANTHER TOLL/INTERLEUKIN-1 RECEPTOR-LIKE PROTEIN 49 209 - -
Dod06g2181 215 Gene3D - 62 214 IPR035897 -
Dod06g2181 215 ProSiteProfiles TIR domain profile. 63 215 IPR000157 GO:0007165
Dod06g2181 215 SMART till_3 64 201 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2181 Dod-Chr6 46105514 46106161 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2181 67 195 Miscellaneous Gene Families AT1G57830 39.535 2.55e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2181 - - ahf:112710439 282.722