Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2178 ATGACGTCTTCTTCTGGAGCTTCACATATAAAATATGTTGTATTCGTCGGTCTCTTACTTATTTCAAATATTAGGGGCATGATGGCGAATACGGTGTCATCAGACAATGCTTCTTCCTATCCGGTGGAAATTTTTACTGATGCTTCTTCTTCCTATCCAGTTGAAACTTTTGCCTTCACTGCTCCTCATATAAAATATGATGTCTTTGTTAGCTTCAGGGGCACCGACATCCGCCAAGGTTTCCTGAGCCATTTGATTAAGGCATTATCTCAAAAGCAAATTTTTGCCTTTGTAGATGATAAACTTGAGAGGGGAGATGAAATATCACAAGCACTTCTGAGAGCAATTGAAAGGTCACTGATTTCATTGATCATATTTTCACCAGACTATGCTTCTTCGTCCTGGTGTTTGGAAGAACTTGTAAAAATAGCTGAGTGCAGGGAAAAAGATGGACAGACTGTAATACCCGTTTTCTATGAAATAGATCCATCAGAAGTACGACATCAAAAGGGAACTTTTGCAAATGCATTTGCTGAACATGAGAAAAAGTATGATAACACCAAGGTGCAAATCTGGCGAAGTGCTTTGAGAGATTCTGCTAATTTGTCTGGATTTCATTCTTCAAACTTTAGCTGTTAA 639 0.385 MTSSSGASHIKYVVFVGLLLISNIRGMMANTVSSDNASSYPVEIFTDASSSYPVETFAFTAPHIKYDVFVSFRGTDIRQGFLSHLIKALSQKQIFAFVDDKLERGDEISQALLRAIERSLISLIIFSPDYASSSWCLEELVKIAECREKDGQTVIPVFYEIDPSEVRHQKGTFANAFAEHEKKYDNTKVQIWRSALRDSANLSGFHSSNFSC* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2178 212 PANTHER TMV RESISTANCE PROTEIN N-LIKE 49 209 - -
Dod06g2178 212 ProSiteProfiles TIR domain profile. 64 212 IPR000157 GO:0007165
Dod06g2178 212 Pfam TIR domain 65 198 IPR000157 GO:0007165
Dod06g2178 212 Gene3D - 63 212 IPR035897 -
Dod06g2178 212 PANTHER TOLL/INTERLEUKIN-1 RECEPTOR-LIKE PROTEIN 49 209 - -
Dod06g2178 212 SUPERFAMILY Toll/Interleukin receptor TIR domain 62 205 IPR035897 -
Dod06g2178 212 SMART till_3 65 202 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2178 Dod-Chr6 46079254 46079953 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2178 68 196 Miscellaneous Gene Families AT1G57830 40.310 9.19e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2178 - - ahf:112710439 276.174