Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2120 ATGTTTATTCCAGGCTTCAACAAGAGCCAAAAGATCAAGGGCACTGTGGTGCTCATGAGCAAGAATGTGTTGGACTTCAATGCTATAACGTCAGCTTCGAGCAGCGTTACTGGCGCAGTTGGGGGCATTTTTAACACTGCCACTGGCTTAGTTGGCTCAGTAGTTGATGGCGCTACTGCTATACTTAGCCGTAACGTCTCCTTACAGCTGATCAGTGCTACCAAGACCGATGGTCGTGGAAATGGGAAACTTGGAAAGGAAACCTATGTGGAGAAACATCTTCCCACTTTACCAACATTAGGAGACAGGCAGGATGCTTTCAGTATTAATTTTGAATATGATGCTGATTTCGGGATTCCAGGAGCATTTTACATTAAAAACTTCATGCAAGTTGAGTTCTTCCTTGTTAGTGTGACCCTTGAAGACATTCCCAATCACGGAAGCATTACCTTTGTTTGCAACTCATGGGTTTACAACTTCAAAAGTTACAAAAACCCCCGCATTTTCTTTGCTAATAATACATATCTTCCAAGTGAAACTCCAGAAGCACTAGTCAAGTACAGAGAAGAAGAATTGGAAAATTTAAGAGGCGATGGAAAAGGGGAACGCAAGGAGTGGGATAGGATCTATGATTATGATGTCTACAATGATTTGGGCAACCCAGACCAGAATCAGAAACTAGCTCGCCCTATTCTTGGAGGGTCTAGCGACTATCCCTACCCTCGCAGGGGAAGAACTGGAAGAAAATCAACAAGCAGAGATCCTAACAGCGAGGCACCAACCTCGAGCACTTACATTCCAAGAGATGAAAACTTTGGTCACTTGAAGTCATCAGATTTCCTTACATATGGAATCAAATCTCTGGCTCAAAACGTTTTACCTCAGTTTCAAAGTGCATTTGGTTTAAATGCTGAGTTTGATAGCTTCGAGGATGTTCGTAGACTCTTTGAAGGTGGACTTTCGCTCCCTACAGATATAATTAGCAAGATCAGTCCCTTACCAGTGATGAAGGAAATCTTCCGCACTGATGGTGAACAAGTCCTCAAGTTCCCACCACCTCATGTAATCAAAGTTAGCAAGTCAGCATGGATGACTGATGAAGAATTCGCAAGAGAGATGATTGCTGGTGTAAACCCCGGCATAATTCAACACCTTCAAGAGTTCCCACCACAAAGCAAGCTAGACGTCTCAAAATATGGTGATCAGACTAGTACAATAACCAAAGAAAACCTCGAGATCAACATGGATGGACTCACAGTAGAAGGGGCAATTGATGGGCACCGGTTATTCATATTAGATTACCATGATGCATTCATGCCGTACTTGAGGTTGATCAATGAAGAAACTAGTTCGAAGATTTATGCCACTAGGACAATCCTTTTCTTGAAAAATGATGGGACTCTGAAGCCATTGGCCATCGAATTAAGTGTGCCACATCGTGACGGATACAAGTTTGGCGCCATCAGTAAAGTCATCTTGCCTGCTGATCAAGGTGTTGAAAGTACAATTTGGCTGCTGGCAAAGGCCTATGTCATTGTAAATGACTCCGGCTATCATCAACTCATCAGCCACTGGTTAAATACTCATGCGGCAATGGAGCCATTTGTCATAGCAACGAACAGGCATCTGAGTGTTCTCCATCCCATTCAAAAACTTCTACTGCCTCACTATCGTGACACGATGAATATCAATGCTCTTGCAAGACAATCCTTAATTAATGCAGGTGGCATTATAGAGCAATCATTTTTTCCGGGACAGTTTTCTATCGAGTTGTCTTCTGTAGTTTACAAGGATTGGGTTTTCACTGATCAAGCACTACCTGCTGATCTTATCAAGAGGTAA 1842 0.4278 MFIPGFNKSQKIKGTVVLMSKNVLDFNAITSASSSVTGAVGGIFNTATGLVGSVVDGATAILSRNVSLQLISATKTDGRGNGKLGKETYVEKHLPTLPTLGDRQDAFSINFEYDADFGIPGAFYIKNFMQVEFFLVSVTLEDIPNHGSITFVCNSWVYNFKSYKNPRIFFANNTYLPSETPEALVKYREEELENLRGDGKGERKEWDRIYDYDVYNDLGNPDQNQKLARPILGGSSDYPYPRRGRTGRKSTSRDPNSEAPTSSTYIPRDENFGHLKSSDFLTYGIKSLAQNVLPQFQSAFGLNAEFDSFEDVRRLFEGGLSLPTDIISKISPLPVMKEIFRTDGEQVLKFPPPHVIKVSKSAWMTDEEFAREMIAGVNPGIIQHLQEFPPQSKLDVSKYGDQTSTITKENLEINMDGLTVEGAIDGHRLFILDYHDAFMPYLRLINEETSSKIYATRTILFLKNDGTLKPLAIELSVPHRDGYKFGAISKVILPADQGVESTIWLLAKAYVIVNDSGYHQLISHWLNTHAAMEPFVIATNRHLSVLHPIQKLLLPHYRDTMNINALARQSLINAGGIIEQSFFPGQFSIELSSVVYKDWVFTDQALPADLIKR* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2120 613 PANTHER LIPOXYGENASE 4 613 - -
Dod06g2120 613 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 10 175 IPR036392 GO:0005515
Dod06g2120 613 ProSitePatterns Lipoxygenases iron-binding region signature 2. 546 556 IPR020834 GO:0016702|GO:0046872
Dod06g2120 613 Gene3D - 276 361 IPR027433 -
Dod06g2120 613 ProSitePatterns Lipoxygenases iron-binding region signature 1. 519 533 IPR020833 GO:0016702|GO:0046872
Dod06g2120 613 Pfam PLAT/LH2 domain 78 170 IPR001024 GO:0005515
Dod06g2120 613 Pfam Lipoxygenase 184 613 IPR013819 GO:0016702|GO:0046872
Dod06g2120 613 Gene3D - 176 275 - -
Dod06g2120 613 Gene3D - 362 492 - -
Dod06g2120 613 SUPERFAMILY Lipoxigenase 176 613 IPR036226 -
Dod06g2120 613 MobiDBLite consensus disorder prediction 253 268 - -
Dod06g2120 613 Gene3D - 493 613 - -
Dod06g2120 613 PRINTS Lipoxygenase signature 519 536 IPR013819 GO:0016702|GO:0046872
Dod06g2120 613 PRINTS Lipoxygenase signature 501 518 IPR013819 GO:0016702|GO:0046872
Dod06g2120 613 PRINTS Lipoxygenase signature 539 559 IPR013819 GO:0016702|GO:0046872
Dod06g2120 613 PANTHER LIPOXYGENASE 4 613 IPR000907 GO:0016702|GO:0046872
Dod06g2120 613 CDD PLAT_LH2 11 172 IPR042057 -
Dod06g2120 613 MobiDBLite consensus disorder prediction 221 270 - -
Dod06g2120 613 SMART LH2_4 10 172 IPR001024 GO:0005515
Dod06g2120 613 PRINTS Plant lipoxygenase signature 239 258 IPR001246 GO:0016491
Dod06g2120 613 PRINTS Plant lipoxygenase signature 348 364 IPR001246 GO:0016491
Dod06g2120 613 PRINTS Plant lipoxygenase signature 387 406 IPR001246 GO:0016491
Dod06g2120 613 PRINTS Plant lipoxygenase signature 167 188 IPR001246 GO:0016491
Dod06g2120 613 PRINTS Plant lipoxygenase signature 303 324 IPR001246 GO:0016491
Dod06g2120 613 PRINTS Plant lipoxygenase signature 454 478 IPR001246 GO:0016491
Dod06g2120 613 PRINTS Plant lipoxygenase signature 141 159 IPR001246 GO:0016491
Dod06g2120 613 PRINTS Plant lipoxygenase signature 206 222 IPR001246 GO:0016491
Dod06g2120 613 ProSiteProfiles PLAT domain profile. 43 171 IPR001024 GO:0005515
Dod06g2120 613 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 174 613 IPR013819 GO:0016702|GO:0046872
Dod06g2120 613 Gene3D PLAT/LH2 domain 3 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2120 Dod-Chr6 42975280 42981708 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2120 9 613 Acyl Lipid Metabolism Gene Families AT1G55020 56.311 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2120 K15718 - gmx:100127399 992.26