Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2110 ATGTTTTCAGGGGTGGCAGGATTGGTGCACAGGGGCCAAAAGCTGAAGGGGACAGTGGTGTTAATGCACAAGAATGTGTTGGACATCAACGCCCTCACCTCTGCTCAGAGTGCCCCTGGCATCATCGGTGTGGTGTCTTCGGTGCTGCCGCTAGTGCCGTTGGCGCCGGAGTTGACACCGTCACTTCCATCGCAGGAAGTGGAAAAGGAAAAGTCGGAAAGCAAACCTTTTTGGAAGGTCTCGACCTTAAGAGCAGGCCAATCTGCATATCCCATTCATTTTGAATGGGACAGTGACATGGGGATTCCTGGAGCCTTTTACATCGAGAATTTTATGCAAAATGAGTTCTACCTTGTGAGTCTGACCCTTGAAGACGTTCCAAACCAAGGAACAATCCACTTTTCTTGCAACTCATGGGTTTACAATGCAAAGAAGTACAAAACTGACCGCATTTTCTTTGCCAACAAGGAGAGCGGAAGGAATGGGAAAAGGATCTATGATTATGATGTCTACAATGATTTGGGTGATCCTGACAAGAATGACAGATTGGCTCGTCCTGTTCTTGGAGGATCTAGCACCTTGCCTTACCCTCGAAGGGGAAGAACTGGCAGAAAACCATCCAAGAAAGATCCTCATAGCGAGAGTCGCAGCGACGTTGTTTACCTTCCAAGGGATGAATCATTTGGTCATTTGAAGTCATCAGACTTTCTTGGTTACGTACTTAAATCTGCGTCTCAAAATGTTATACCTCAATTGCAATCTGCACTTAAATTGCAATTCAAAGATCCTGAGTTTAATAGCTTTGAGGAAGTTCGTGGACTTTATGAGGGAAGTATTAAGTTGCCTACTAATATACTTAGTGAACTTAGCCCCATACCATTGTTCACGGAGCTATCTCTTAAAATATTCTCATTTGGAGCAGTGGAACAGTCTGCATGGATGACTGATGAAGAATTTGCAAGAGAGATGATTGCTGGTGTTAATCCACACATTAGAAGACTTAAGGAGTTCCCGCCAAAGAGCAAGCTAGATAAACAACTTTATGGTGATAATACCAGTACAATAACCAAAGAACAGATAGAGCCAAACCTGGGTGGGTTAACTGTGAATCAGGCTATTGACCACCACAAATTATACATACTGGATCACCATGACTCAATCTTTCCATATCTGAGGAAGATAAATGCAACCACAACAAAGGCCTATGCTACTAGAACAATCCTTTACTTGCAAAGCAATGGAACTCTAAAGCCATTGGCCATTGAGCTAAGTAAGCCGCATCCTCAGGATGATAGTTATGGCCCTGTTAGTAATGTTTACCTGCCTGCAAGTGAAGGTGTTGAAGCTTCTCTTTGGCTACTTGCCAAGGCTTATGTAGTCGTAAATGACTCCTGCTATCACCAACTTGTCAGCCATTGGCTAAACACACATGCTGTTGTTGAGCCATTCATCATTGCAACAAACAGGCATCTAAGTGTGGTTCATCCTATTCATAAACTTCTGCTTCCACATTATCGTGACACAATGAACATAAATGCACTTGCACGGAATGTCCTCGTCAATGCAGAGGGAATCATAGAATCAACATTCTTGTGGGGAAAATATGCTTTGGAAATGTCTGCTGTATTATACAAGGATTGGGTTTTCACCGACCAAGCATTGCCTGCTGATCTTCTGAAGAGAGGAGTCGCCTATAGGGATTCAAGTGCCCCACACGGCATCCATCTTTTGATTGATGACTATCCTTATGCTGCTGATGGACTAGAGATATGGTTTGCTATAAGGTCATGGGTTAAAGAATACGTCTCTTTCTACTACAACTCTGATGCTGCAGTTGCACAAGATTCTGAACTGCAAGCATTCTGGAAAGAGCTCGTAGAGCCCCTTCATGCAGCTGTTAATTTTGGCCAATACCCATATGGAGGTTACATCCTTAACCGTCCAACTCTTAGCAGGCAATTCATGCCTGAGAAAGGAGCCCCCGAGTTTGAAGAGCTGGCTAAGAACCCTCAAAAAGTGTTCTTGAGGACAATTACTGGAAAGAATGAGGCTCTTACTGACCTCACAATTATAGAGATATTGTCAAGGCATGCATCTGATGAGCTCTACCTTGGACAGAGAGATGGTGGTGACATTTGGACTGCTGACACAGCGCCAATTGAGGCCTTCAAGAGGTTTGGAAAGAACTTGGCTGAAATTGAGCAAAAGCTCATACAGAGGAACAATGATGAGAGGCTAAGGAACCGATATGGGCCGGCAAAGATGGCCTATACTCTGCTTTATCCTTCAAGTGAGGAAGGATTGACTTTCAGGGGCATTCCCAACAGCATATCTATCTAA 2340 0.4393 MFSGVAGLVHRGQKLKGTVVLMHKNVLDINALTSAQSAPGIIGVVSSVLPLVPLAPELTPSLPSQEVEKEKSESKPFWKVSTLRAGQSAYPIHFEWDSDMGIPGAFYIENFMQNEFYLVSLTLEDVPNQGTIHFSCNSWVYNAKKYKTDRIFFANKESGRNGKRIYDYDVYNDLGDPDKNDRLARPVLGGSSTLPYPRRGRTGRKPSKKDPHSESRSDVVYLPRDESFGHLKSSDFLGYVLKSASQNVIPQLQSALKLQFKDPEFNSFEEVRGLYEGSIKLPTNILSELSPIPLFTELSLKIFSFGAVEQSAWMTDEEFAREMIAGVNPHIRRLKEFPPKSKLDKQLYGDNTSTITKEQIEPNLGGLTVNQAIDHHKLYILDHHDSIFPYLRKINATTTKAYATRTILYLQSNGTLKPLAIELSKPHPQDDSYGPVSNVYLPASEGVEASLWLLAKAYVVVNDSCYHQLVSHWLNTHAVVEPFIIATNRHLSVVHPIHKLLLPHYRDTMNINALARNVLVNAEGIIESTFLWGKYALEMSAVLYKDWVFTDQALPADLLKRGVAYRDSSAPHGIHLLIDDYPYAADGLEIWFAIRSWVKEYVSFYYNSDAAVAQDSELQAFWKELVEPLHAAVNFGQYPYGGYILNRPTLSRQFMPEKGAPEFEELAKNPQKVFLRTITGKNEALTDLTIIEILSRHASDELYLGQRDGGDIWTADTAPIEAFKRFGKNLAEIEQKLIQRNNDERLRNRYGPAKMAYTLLYPSSEEGLTFRGIPNSISI* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2110 779 Pfam PLAT/LH2 domain 69 153 IPR001024 GO:0005515
Dod06g2110 779 Gene3D - 330 463 - -
Dod06g2110 779 ProSiteProfiles PLAT domain profile. 38 154 IPR001024 GO:0005515
Dod06g2110 779 PANTHER LIPOXYGENASE 7 157 IPR000907 GO:0016702|GO:0046872
Dod06g2110 779 Pfam Lipoxygenase 629 762 IPR013819 GO:0016702|GO:0046872
Dod06g2110 779 Pfam Lipoxygenase 160 626 IPR013819 GO:0016702|GO:0046872
Dod06g2110 779 Gene3D - 156 249 - -
Dod06g2110 779 SUPERFAMILY Lipoxigenase 160 779 IPR036226 -
Dod06g2110 779 Gene3D - 250 329 IPR027433 -
Dod06g2110 779 SMART LH2_4 13 155 IPR001024 GO:0005515
Dod06g2110 779 Gene3D PLAT/LH2 domain 5 155 - -
Dod06g2110 779 Gene3D - 464 627 - -
Dod06g2110 779 PANTHER LINOLEATE 9S-LIPOXYGENASE-4 7 157 - -
Dod06g2110 779 PANTHER LIPOXYGENASE 629 779 IPR000907 GO:0016702|GO:0046872
Dod06g2110 779 PANTHER LIPOXYGENASE 162 627 IPR000907 GO:0016702|GO:0046872
Dod06g2110 779 PANTHER LINOLEATE 9S-LIPOXYGENASE-4 629 779 - -
Dod06g2110 779 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 138 779 IPR013819 GO:0016702|GO:0046872
Dod06g2110 779 ProSitePatterns Lipoxygenases iron-binding region signature 2. 494 504 IPR020834 GO:0016702|GO:0046872
Dod06g2110 779 ProSitePatterns Lipoxygenases iron-binding region signature 1. 467 481 IPR020833 GO:0016702|GO:0046872
Dod06g2110 779 PRINTS Lipoxygenase signature 449 466 IPR013819 GO:0016702|GO:0046872
Dod06g2110 779 PRINTS Lipoxygenase signature 467 484 IPR013819 GO:0016702|GO:0046872
Dod06g2110 779 PRINTS Lipoxygenase signature 487 507 IPR013819 GO:0016702|GO:0046872
Dod06g2110 779 PRINTS Plant lipoxygenase signature 691 705 IPR001246 GO:0016491
Dod06g2110 779 PRINTS Plant lipoxygenase signature 402 426 IPR001246 GO:0016491
Dod06g2110 779 PRINTS Plant lipoxygenase signature 124 142 IPR001246 GO:0016491
Dod06g2110 779 PRINTS Plant lipoxygenase signature 336 355 IPR001246 GO:0016491
Dod06g2110 779 Gene3D - 628 778 - -
Dod06g2110 779 PANTHER LINOLEATE 9S-LIPOXYGENASE-4 162 627 - -
Dod06g2110 779 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 13 156 IPR036392 GO:0005515
Dod06g2110 779 MobiDBLite consensus disorder prediction 181 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2110 Dod-Chr6 42236300 42243040 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2110 1 779 Acyl Lipid Metabolism Gene Families AT1G55020 49.827 0.0 804
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2110 K15718 - gmx:100816880 1217.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g3207 01 72990565 72992540 Dod06g2110 06 42236300 42243040 PCT