Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2055 ATGGCCCTTGTGAACGAAATTATGAGTTCTTCTTTCTCAGAGAGGTCTTTGTTTGTTTCTTCTTCCTCGAGGGGCCTTCTTCACCGTTTTCATCAGAAGCAAACCCGGTTCTTTGTAAGCCCTGTGTTGGTTCCTTTGGAAAATAGAAGGGTTGTGAGGTTGAGGAAGACTGCAAAGTTTCCTGTGGCGGCAATTAGTGAGGATTTGGTGAGGGACTCTTCTTCTTCTTCTTCACCATCATCATCTTCCTCTCCTTCAACTACTACTTCGGTGCCTGCGGAGAAACCAGTGAAGTTCAAGGTTAGAGCTGTGGTGACAGTGAGGAATAAGATCAAAGAAGATTTCAAAGAGACCCTTGTGAAGCATTTGGATGCTTTCACTGACAGGATAGGAAGGAATGTTGTGTTGGAACTTGTTAGCACCGAGATTGATCAAAAAACGAAAGCTGCGAAGAAGAGTAGCGAAGCAGAGCTGAAAGATTGGTCGAAGAAATCCAATGTCAAAGCTGAGAGAGTTAATTACACTGCTGAGTTCATGGTGGACTCTGATTTTGGGGTGCCCGGAGCAATTACTGTGACAAACAAACACCAGCAAGAGTTTTTCTTGGAAAGTATTACTATTGAAGGATTTGCCACTGGAACTGTTCATTTCCCTTGCAACTCATGGGTACAGGCCAGAAAACATCATCCTGGAAAGAGGATATTCTTTTCCAATAAGCCCTATTTACCCGGTGATACACCTGCTGGTCTTAGATTTCTGAGGGAAAAGGAGTTGAGAAATCTCAGAGGTGATGGCAAAGGAGTTAGAAAGTTATCTGACAGAATATATGACTACGACACATACAATGATCTGGGAAACCCGGATAGAGCTCCTGAATTTGCGAGACCAACCCTTGGAGATTCAGAGAAGTATCCATACCCAAGACGGTGTCGTACTGGCCGTGCCCCATCTGATACTGACATGTATGCAGAGAGTCGTGTGGAGAAACCTCTTCCTATGTACGTACCAAGAGATGAACGATTTGAGGAGTCTAAGCAGAATACGTTCACTGTTAAGAGGCTTAAGGCTGTGCTTCACAACTTGATTCCTGGGCTCAAAGCTAGTCTTTCTGCTGATAATCAAGACTTCAATGATTTCTCAGATGTTGACGGCCTTTACAGTGAAGGGCTGCTCATCAAGATGGGGTTGCAAGATGATGTTTTGAAGAAACTCCCGTTGCCAAACGTGGTCAGTAAGATCCAAGAATCCAGCCAGGGACTTCTTAAGTATGACACTCCCAAGATTATTTCCAAGGACAAATTTGCCTGGCTGCGAGATGACGAATTTGCCCGCCAAGCAATTGCCGGAGTCAACCCTGTTAACATTGAGAGACTTAAAGTTTTTCCGCCCGTGAGCAAGCTTGACCCGGAATTATATGGTCCACAAGAGTCTGCTCTTAAAGAAGAGCACATTTTAAGCCAGCTTAACGGCATGACTGTGCAACAGGCAATTGAGGAAAATAAGTTGTTTATTATCGATTATCATGATGTTTACCTTCCGTTTCTGGAAAGGATTAATGCCCTTGATGGTAGAAAATCATATGCTACACGTACCATTTTTTTCTTGACACCCCTTGGTACTCTCAAGCCTCTGGCTATAGAACTTAGCCTGCCTCCTGCTGGACCAAGCTCTCGTTCAAAACGTGTAGTTACACCTCCTGTAGATGCAACAACCTATTGGATGTGGCAGCTTGCTAAGGCCCATGTTTGCTCCAATGATGCTGGTGTGCACCAACTTGTTAACCATTGGCTACGCACCCATGCTTGCATGGAAACATTTATATTGGCGGCTCATAGGCAATTGAGTGCTATGCATCCTATTTTCAAGTTATTGGATCCTCACATGAGGTACACCTTGGAGATCAATGCCATAGCTCGCCAGAGCTTGATCTGTGCTGATGGAATTATTGAGAATTGCTTCACTCCTGGCCGCTACAGCATGGAGATTAGTTCGGCTGCTTACAAAAACTTATGGCGTTTTGACATGGATAGCCTCCCTGCTGATCTCATCCGCAGAGGAATGGCAATACCTGACCCAACCCAACCACATGGTCTGAAGCTTGTACTGGAAGACTATCCTTATGCTGCTGATGGGCTTATGATCTGGTTTGCAATAGAAAACTGGGTCCGTACCTATGTGAACCGTTACTACCCAGAGTCAAGCCTGATAAGCAACGACAAGGAGCTACAAGCATGGTACTCTGAGTCAATCAATGTGGGCCATGCTGATCTTCGGCATGAAAGCTGGTGGCCCACATTGAACACAAGTGAGGATCTTGTCTCCATTCTTACCACATTGATTTGGCTTGCATCTGCTCAACATGCTGCTCTTAACTTTGGGCAGTATCCCTATGGTGGGTATGTGCCGAATCGTCCCCCATTGATGCGAAGATTAATACCTGATGAGAGTGACCCGGAATATACCAGTTTTCAAGCAGACCCACAGAAGTATTTCCTCAATGCAATGCCTAGCTTGTTGCAAGCTACAAAGTTCATGGCCGTGGTTGACACACTCTCGACTCACTCACCTGACGAAGAGTACTTGGGAGAGAGACAACAACCATCCATTTGGTCAGGTGATGCTGAGATCGTTGAGGCGTTCTACGAGTTCTCTGCAGAGATCAGACGGATCGATAAGGTGATTGATAGCAGGAACTGTGATAGGAAGCTAAGGAACCGTTGTGGTGCAGGGGTGTTACCTTATGAGTTGCTTGCACCAAGCTCTGAACCTGGTGTTACATGCAGAGGAGTTCCAAACAGTGTGTCAACTTAA 2811 0.4536 MALVNEIMSSSFSERSLFVSSSSRGLLHRFHQKQTRFFVSPVLVPLENRRVVRLRKTAKFPVAAISEDLVRDSSSSSSPSSSSSPSTTTSVPAEKPVKFKVRAVVTVRNKIKEDFKETLVKHLDAFTDRIGRNVVLELVSTEIDQKTKAAKKSSEAELKDWSKKSNVKAERVNYTAEFMVDSDFGVPGAITVTNKHQQEFFLESITIEGFATGTVHFPCNSWVQARKHHPGKRIFFSNKPYLPGDTPAGLRFLREKELRNLRGDGKGVRKLSDRIYDYDTYNDLGNPDRAPEFARPTLGDSEKYPYPRRCRTGRAPSDTDMYAESRVEKPLPMYVPRDERFEESKQNTFTVKRLKAVLHNLIPGLKASLSADNQDFNDFSDVDGLYSEGLLIKMGLQDDVLKKLPLPNVVSKIQESSQGLLKYDTPKIISKDKFAWLRDDEFARQAIAGVNPVNIERLKVFPPVSKLDPELYGPQESALKEEHILSQLNGMTVQQAIEENKLFIIDYHDVYLPFLERINALDGRKSYATRTIFFLTPLGTLKPLAIELSLPPAGPSSRSKRVVTPPVDATTYWMWQLAKAHVCSNDAGVHQLVNHWLRTHACMETFILAAHRQLSAMHPIFKLLDPHMRYTLEINAIARQSLICADGIIENCFTPGRYSMEISSAAYKNLWRFDMDSLPADLIRRGMAIPDPTQPHGLKLVLEDYPYAADGLMIWFAIENWVRTYVNRYYPESSLISNDKELQAWYSESINVGHADLRHESWWPTLNTSEDLVSILTTLIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLIPDESDPEYTSFQADPQKYFLNAMPSLLQATKFMAVVDTLSTHSPDEEYLGERQQPSIWSGDAEIVEAFYEFSAEIRRIDKVIDSRNCDRKLRNRCGAGVLPYELLAPSSEPGVTCRGVPNSVST* 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2055 936 Pfam PLAT/LH2 domain 151 236 IPR001024 GO:0005515
Dod06g2055 936 Gene3D PLAT/LH2 domain 87 241 - -
Dod06g2055 936 Gene3D - 434 567 - -
Dod06g2055 936 PRINTS Plant lipoxygenase signature 233 254 IPR001246 GO:0016491
Dod06g2055 936 PRINTS Plant lipoxygenase signature 848 862 IPR001246 GO:0016491
Dod06g2055 936 PRINTS Plant lipoxygenase signature 207 225 IPR001246 GO:0016491
Dod06g2055 936 PRINTS Plant lipoxygenase signature 460 479 IPR001246 GO:0016491
Dod06g2055 936 PRINTS Plant lipoxygenase signature 373 394 IPR001246 GO:0016491
Dod06g2055 936 PRINTS Plant lipoxygenase signature 527 551 IPR001246 GO:0016491
Dod06g2055 936 PRINTS Plant lipoxygenase signature 305 324 IPR001246 GO:0016491
Dod06g2055 936 PRINTS Plant lipoxygenase signature 421 437 IPR001246 GO:0016491
Dod06g2055 936 PRINTS Plant lipoxygenase signature 272 288 IPR001246 GO:0016491
Dod06g2055 936 ProSitePatterns Lipoxygenases iron-binding region signature 1. 590 604 IPR020833 GO:0016702|GO:0046872
Dod06g2055 936 Pfam Lipoxygenase 250 919 IPR013819 GO:0016702|GO:0046872
Dod06g2055 936 MobiDBLite consensus disorder prediction 71 92 - -
Dod06g2055 936 PANTHER LIPOXYGENASE 3, CHLOROPLASTIC 45 935 - -
Dod06g2055 936 ProSiteProfiles PLAT domain profile. 115 237 IPR001024 GO:0005515
Dod06g2055 936 PANTHER LIPOXYGENASE 45 935 IPR000907 GO:0016702|GO:0046872
Dod06g2055 936 Gene3D - 569 935 - -
Dod06g2055 936 SMART LH2_4 99 238 IPR001024 GO:0005515
Dod06g2055 936 Coils Coil 934 936 - -
Dod06g2055 936 Gene3D - 345 433 IPR027433 -
Dod06g2055 936 ProSitePatterns Lipoxygenases iron-binding region signature 2. 617 627 IPR020834 GO:0016702|GO:0046872
Dod06g2055 936 PRINTS Lipoxygenase signature 610 630 IPR013819 GO:0016702|GO:0046872
Dod06g2055 936 PRINTS Lipoxygenase signature 590 607 IPR013819 GO:0016702|GO:0046872
Dod06g2055 936 PRINTS Lipoxygenase signature 572 589 IPR013819 GO:0016702|GO:0046872
Dod06g2055 936 CDD PLAT_LH2 99 238 IPR042057 -
Dod06g2055 936 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 99 241 IPR036392 GO:0005515
Dod06g2055 936 Gene3D - 242 344 - -
Dod06g2055 936 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 240 936 IPR013819 GO:0016702|GO:0046872
Dod06g2055 936 SUPERFAMILY Lipoxigenase 243 935 IPR036226 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2055 Dod-Chr6 36561481 36567001 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2055 1 935 Acyl Lipid Metabolism Gene Families AT1G72520 72.910 0.0 1409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2055 K00454 - gmx:100793614 1600.1