Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1921 ATGCATGGTGTACTAAGCAAAGCTTATCTAGAAATTGTAACTAACAAATTCACTGAATTTTTTTGCAGACTAGAAATTGAGATGGATGCTGATCACAGGATTGCCGGATTCAAGTACGAGTGCTTGCTTTTTGATATGGATGACACCCTCTACCCATTAAGCGTAGGACTCAATTTGGTATGCCGCAAGAACATACAAGATTATATGTTGGAATACTTGCATATTGAAGGAAGTGAAGTGCCAAGCATGTGCCTGGATTTGTATAGAGAATATGGGACAACTATGGCAGGATTAAAGGTCCTTGGTTATGAGTTTGACAATGATGAATTTCATGCCTACGTGCATGGAAGATTGCCATATGAGAAACTGAAGCCTGATCCAGTGTTAAGGAACCTTCTGCTTTCCATGCCTCAGCGTAAAATAATATTCACCAATGCAGATCACGCACATGCAGTTCAAGTTCTCAACAGATTGGGTTTGGAAGATTGTTTTGAGGGCATCATATGCTTTGAAACACTTAATCCTCCCAAACAAATTAGTTACGTGGAAATACCGAAGGATAATCATGTGCTCACAGAGAGTAAATTGCCTAATAATTCCGATAATTTAACTGATAGTGGATGCTTTGGCTTCCCCTCGCGTATCATTTGCAAACCTTCTACCGGAGCCTTTGAAGCTGCTATTCGGATAGCTAATGTTGATCCAAAGAAAACAATTTTCTTTGATGACAGTGCTAGAAATGTTGCAAGCGGAAAAGCAGCCGGACTTCATACTGTTATAGTGGGGCGTTCAGACTTGGTGCCTGGTGCTGACCATGCCCTGAGTAGCATTCATAATATCAAAGAAGCAGTACCTGAAATATGGGAGGTTGAAGAAGGCAACCAAAAGCAGAGGATCCAATCCCAAGCACTTGAAGCCATGGTCATTGCATAA 933 0.4105 MHGVLSKAYLEIVTNKFTEFFCRLEIEMDADHRIAGFKYECLLFDMDDTLYPLSVGLNLVCRKNIQDYMLEYLHIEGSEVPSMCLDLYREYGTTMAGLKVLGYEFDNDEFHAYVHGRLPYEKLKPDPVLRNLLLSMPQRKIIFTNADHAHAVQVLNRLGLEDCFEGIICFETLNPPKQISYVEIPKDNHVLTESKLPNNSDNLTDSGCFGFPSRIICKPSTGAFEAAIRIANVDPKKTIFFDDSARNVASGKAAGLHTVIVGRSDLVPGADHALSSIHNIKEAVPEIWEVEEGNQKQRIQSQALEAMVIA* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1921 310 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 38 291 - -
Dod06g1921 310 SFLD C1.5.3: 5'-Nucleotidase Like 38 291 IPR010237 -
Dod06g1921 310 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 217 261 IPR006439 -
Dod06g1921 310 SUPERFAMILY HAD-like 38 285 IPR036412 -
Dod06g1921 310 Gene3D - 103 288 IPR023214 -
Dod06g1921 310 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 35 310 - -
Dod06g1921 310 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 40 261 IPR010237 -
Dod06g1921 310 PANTHER OS07G0634400 PROTEIN 35 310 - -
Dod06g1921 310 CDD HAD_5NT 41 263 IPR010237 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1921 Dod-Chr6 28144981 28147823 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1921 K18551 - gmx:100814291 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1921 06 28144981 28147823 Dod06g1921 06 28144981 28147823 ECH
Dod01g3235 01 73355267 73356932 Dod06g1921 06 28144981 28147823 PCT