Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g1872 ATGGGCTCCGAAGGTCCTCCAGCAGCAATTACAACGGTTCATGTAACAGGCTTCAAGAAATTTCATGGAGTTTCAGAGAATCCAACGGAGACGATTGTCAATAATTTGACAGAGTATATGAAGAAGAAGGGTTTACCGAAAGGTTTAGCCATTGGAAGCTGCAGCATTCTCGAGACTGCTGGTCAAGGAGCACTTGTTCCTCTGTACCAAACATTGCAATCTGCCATTAGTGACAAGGGCTCCGAATCTTCTAGTTCCAACAAAATTATCTGGCTGCATTTTGGAGTTAACAGTGGTGCAACACGGTTTGCTATAGAGAATCAAGCTGTCAATGAGGCTACCTTCCGTTGCCCTGATGAAATGGGGTGGAAGCCACAGAAAGTTGCCATCATTCCTTCAGATGGTCCAATTTCACGTGTCCGGGTGACTTCCCTTCCTGTGGAGGAGATCACCAAGGCTTTGGCAAAGAAGGGTTATGATGTAATGACATCTGATGATGCGGGCAGGTTTGTGTGCAATTATGTTTACTATCATTCCCTTCGTTTCGCCGAAGAGAACGGGAACAAATCCCTTTTTGTGCATGTGCCACTCTTCTTTACAATCAATGAAGAGACCCAAATGCAGTTCGCCGCATCCTTGTTAGAGGTACTTGCTTCTGTGTGTTAG 666 0.4535 MGSEGPPAAITTVHVTGFKKFHGVSENPTETIVNNLTEYMKKKGLPKGLAIGSCSILETAGQGALVPLYQTLQSAISDKGSESSSSNKIIWLHFGVNSGATRFAIENQAVNEATFRCPDEMGWKPQKVAIIPSDGPISRVRVTSLPVEEITKALAKKGYDVMTSDDAGRFVCNYVYYHSLRFAEENGNKSLFVHVPLFFTINEETQMQFAASLLEVLASVC* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g1872 221 Gene3D - 9 220 IPR036440 -
Dod06g1872 221 CDD Peptidase_C15 12 219 IPR000816 GO:0005829|GO:0006508|GO:0016920
Dod06g1872 221 PANTHER BNAA09G15240D PROTEIN 1 220 - -
Dod06g1872 221 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 1 220 IPR016125 -
Dod06g1872 221 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 12 219 IPR036440 -
Dod06g1872 221 Pfam Pyroglutamyl peptidase 13 198 IPR016125 -
Dod06g1872 221 PIRSF Pyrrolidone-crbxlat_pptds 10 221 IPR000816 GO:0005829|GO:0006508|GO:0016920
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g1872 Dod-Chr6 27053777 27057123 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g1872 K01304 - gmx:100500630 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g1872 06 27053777 27057123 Dod06g1872 06 27053777 27057123 ECH
Dod01g3283 01 73849523 73852509 Dod06g1872 06 27053777 27057123 PCT