Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0768 ATGAAGCTTCTAGAACCTTCTGATCCCGACCCACCTCCCTGTTCCTCTTCCAAACCCTTAAAGTACACTCCTTTGGAGCAGCAAGTTGTGGAGCTCAAAGCTATACCAACTTTTCGATTGAATGTCCATGTGAGGAGGCTTGTGAGTGCTGGTTACAAGGTTGGTGTTGTTAGGCAGACCGAGACTGCGGCCATTAAAGCCCACGGTTCGAACCGGTTAGGCCCCTTTTGCAGGGGTTTGTCAGCGTTGTACACGAAGGCCACACTGGAGGCAGCGCCGGATTTGGGGGGAGGGGAGGAGGGGTGTGGGGCTGACAGCAATTACTTGATGTGTGTTGTGGAGAAGAGCATTTTGGGAGAGAGGTCTAATTGTGGTGGGATGGAGGGTGGTTATGATGTGAGGATTGGATTTGTTGCTGTGGAGATATCAACTGGGGATGTTGTTTATAGGGAGTTTAATGACAGTTTTTTGAGGAGTCAGCTTGAGGCTGTGATTTTGAGCTTGTCTCCTGCAGAGTTGCTTCTTGGGGACCCTCTTTCCAAACAAACAGAGAAGTTATTATTGGCTTTTGCTGGACCTGCCTCAAATGTTCGTGTGGAGCGAACCTCGCGAGATTGCTTTGCTGATGGAGGTGCTCTGGCTGAAGTGTTGACCTTGTATGAAAACATAGGTGTAGGCAGTTCGTCAGATTCACTGCAGAACAATGATTTGATTGAGCACAGAAATCAGCAGTTGGTTGTTGAGGAGGTGATGAACATGCCAGATTTGGCCCTTTCAACCAATATGGAAATGACCCTCTCAGCCAATGCACTTCAACAGCTGGAGGTTTTAAAAAATAACAGTGATGGATCCGAGAATGGTTCCTTGCTGCATATAATGAATCACACCCTTACCATATTTGGTTCCAGGCTTCTTAGGCATTGGGTATCTCACCCATTGTGTGATCAAACCATGATTTCTGCTCGTCTTCGTGCTGTATCCGAAATTGCAGAGTCCATGGGATCTTGTAATGGGATGAAGAATCCAGGGTATGACGATGAAGACCCTGATCTAACAGTTGTGCGACCTGATGTTATTGGCAATGCTGCCAAAATGTTGTCATCTTTAAACAAAGAATCTGCTGATCAAGGTGATCTAACAAATTTGATCATTACATCTGAGGGACAATTTCCAGAGGTTATTAGAGCTCGAAAGGCTTTTCAGATGGAAGTGGAACAATTAGATTCGTTAATTGGCTTGTATCGCAAACGACTTGGAATGCGAAGTTTGGAATTCATGAGTGTTTCGGGAATAACTCATTTGATAGAGTTATCGACTGATGAGAAGGTTCCTTCCAACTGGGTCAAGGTAAATAGCACAAAGAAAACAATTCGGTATCACCCTTCTGAAGTAGTGACAGCATTGGACAAGGTATCATTAGCTAAAGAGAAGCTTACTGTTGCTTGCCGAGCTGCTTGGGATAGCTTTCTGAGGGACTTCAGTAAACACTATGCAGAGTTCCAGGCTGCTGTTCAAGCACTGGCTGCTTTAGATTGTTTACACTCACTTGCCATTCTTTCAAGAAACAAGGGTTATGTTCGCCCAGTGTTTGTAGATGATTATGAGCCTGTTCAGATACAAATTTGTTCTGGTCGACATCCGGTTTTGGAGACTACCTTACAAGACGACTTTGTCCCAAATGATACAAAGATGCATGCAGACAGAGAGTACTGCCAGATTGTCACTGGACCCAATATGGGGGGCAAAAGTTGTTATGTTCGCCAGGTGGCTCTGATTGCTATAATGGCTCAGCATCATCAACAAAACTGCATGTCCTGGACTGGGATCTACACCCGGATGGGTGCTTCTGACAGTATTCAGCAAGGCAGAAGCACCTACCTAGAGGAACTAAGTGAGACTTCACATATACTTCATAACTGCACAGGAAATTCACTAGTTATCATTGATGAGCTTGGGAGAGGCACGAGTACACATGATGGTACGGCCATTGCTTATTCGACACTGCATTATCTTCTGAAGCAAAAAAGAAGCATGGTCCTCTTTGTTACTCACTATCCGAAGATTGCTGACCTCACTACTGAGTTTCCAGGCTCTGTGGGAGCATATCACGTGTCACATTTGACCTCACATGATGATACAAGTGAAAACAAAAATTTGGATCATGATGATGTTACTTATCTATACAAGCTTGTACCTGGTGTGTCAGAGAGGAGTTTTGGATTCAAGGTAGCTCAGCTTGCACAGTTACCCCCACATTGCATTAGTCGAGCCATTGTTATGGCTTCCAAATTAGAAGCACTAGTAAACAGTAGAATACATAGTAGATCGGGAAAGCGGCCGTCGCCGTGTGCACTGGTGATTGATCCAGAACAAGAACTGAATCAGCTTATATTCCAACCACACGATTTTCCTCATCAAGAGTTTGGCAGTGCTTACAGGGAGTTCCATTCAAACTTAAAAGCTGCAATACTGGACGATGACCATGCAAAAAACTTTCAGCTATTGGAGCATGCTAAAATAATTGCAAAGAAATTAATTGGCAGGTTAGGCCTTTACATTTTTGCTTCTTTACCTCCATTCCCGTCTATGTAG 2592 0.4441 MKLLEPSDPDPPPCSSSKPLKYTPLEQQVVELKAIPTFRLNVHVRRLVSAGYKVGVVRQTETAAIKAHGSNRLGPFCRGLSALYTKATLEAAPDLGGGEEGCGADSNYLMCVVEKSILGERSNCGGMEGGYDVRIGFVAVEISTGDVVYREFNDSFLRSQLEAVILSLSPAELLLGDPLSKQTEKLLLAFAGPASNVRVERTSRDCFADGGALAEVLTLYENIGVGSSSDSLQNNDLIEHRNQQLVVEEVMNMPDLALSTNMEMTLSANALQQLEVLKNNSDGSENGSLLHIMNHTLTIFGSRLLRHWVSHPLCDQTMISARLRAVSEIAESMGSCNGMKNPGYDDEDPDLTVVRPDVIGNAAKMLSSLNKESADQGDLTNLIITSEGQFPEVIRARKAFQMEVEQLDSLIGLYRKRLGMRSLEFMSVSGITHLIELSTDEKVPSNWVKVNSTKKTIRYHPSEVVTALDKVSLAKEKLTVACRAAWDSFLRDFSKHYAEFQAAVQALAALDCLHSLAILSRNKGYVRPVFVDDYEPVQIQICSGRHPVLETTLQDDFVPNDTKMHADREYCQIVTGPNMGGKSCYVRQVALIAIMAQHHQQNCMSWTGIYTRMGASDSIQQGRSTYLEELSETSHILHNCTGNSLVIIDELGRGTSTHDGTAIAYSTLHYLLKQKRSMVLFVTHYPKIADLTTEFPGSVGAYHVSHLTSHDDTSENKNLDHDDVTYLYKLVPGVSERSFGFKVAQLAQLPPHCISRAIVMASKLEALVNSRIHSRSGKRPSPCALVIDPEQELNQLIFQPHDFPHQEFGSAYREFHSNLKAAILDDDHAKNFQLLEHAKIIAKKLIGRLGLYIFASLPPFPSM* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0768 863 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 525 765 IPR027417 -
Dod06g0768 863 MobiDBLite consensus disorder prediction 1 20 - -
Dod06g0768 863 Pfam MutS domain II 107 184 IPR007860 GO:0005524|GO:0006298|GO:0030983
Dod06g0768 863 SMART DNAend 284 552 IPR007696 GO:0005524|GO:0006298|GO:0030983
Dod06g0768 863 PIRSF Msh6 336 821 IPR017261 GO:0006298|GO:0030983
Dod06g0768 863 PIRSF Msh6 19 341 IPR017261 GO:0006298|GO:0030983
Dod06g0768 863 Pfam MutS domain V 572 765 IPR000432 GO:0005524|GO:0006298|GO:0030983
Dod06g0768 863 Gene3D - 525 783 IPR027417 -
Dod06g0768 863 PANTHER DNA MISMATCH REPAIR PROTEIN MSH3 356 844 - -
Dod06g0768 863 MobiDBLite consensus disorder prediction 1 18 - -
Dod06g0768 863 SMART mutATP5 569 762 IPR000432 GO:0005524|GO:0006298|GO:0030983
Dod06g0768 863 Gene3D - 367 493 - -
Dod06g0768 863 Gene3D - 263 313 - -
Dod06g0768 863 Pfam MutS domain I 28 90 IPR007695 GO:0005524|GO:0006298|GO:0030983
Dod06g0768 863 Gene3D MutS, connector domain 103 262 IPR036678 GO:0005524|GO:0006298|GO:0030983
Dod06g0768 863 SUPERFAMILY DNA repair protein MutS, domain III 268 522 IPR036187 -
Dod06g0768 863 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 35 340 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
Dod06g0768 863 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 356 844 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
Dod06g0768 863 SUPERFAMILY DNA repair protein MutS, domain I 18 88 IPR016151 GO:0005524|GO:0006298|GO:0030983
Dod06g0768 863 ProSitePatterns DNA mismatch repair proteins mutS family signature. 644 660 IPR000432 GO:0005524|GO:0006298|GO:0030983
Dod06g0768 863 Gene3D DNA repair protein MutS, domain I 18 94 IPR016151 GO:0005524|GO:0006298|GO:0030983
Dod06g0768 863 SUPERFAMILY DNA repair protein MutS, domain II 105 187 IPR036678 GO:0005524|GO:0006298|GO:0030983
Dod06g0768 863 Pfam MutS domain III 269 517 IPR007696 GO:0005524|GO:0006298|GO:0030983
Dod06g0768 863 PANTHER DNA MISMATCH REPAIR PROTEIN MSH3 35 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0768 Dod-Chr6 9321459 9329587 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0768 K08736 - mus:103973219 780.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0768 06 9321459 9329587 Dod06g0768 06 9321459 9329587 ECH