Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0751 ATGGGGAACTCGTTTGGGTGCTCTGCCTCCGGGGAGAGGCTGGTGTCTGCGGCGAGGGACGGTGACCTTGTTGAGGCCAAGATGCTCTTGAACTTCAACCCTTGTCTCGCCAAGTACTCCACTTTCGGTGGCCTCAATTCCCCTCTCCATTTCGCTGCTGCCAAGGGCCACAACGAGATTGTGGCATTGTTGCTTGAGAATGGAGCTGATGTCAATTCGAGGAATTATTGTGGCCAGACGGCCTTGATGCAAGCTTGTAAATATGGGCATTGGGAAGTTGTACAGACCCTTCTGCTCTTCAGATGCAATGTTATGAGAGCAGATTATCTCAGTGGGCGGACAGCACTTCACTTTGCAGCTGTGAATGGGCATGTCAGATGTATTAGACTTGTTGTGGCTGACTTTGTTCCGAGTGCTCCATATGAAGCTATACATGCTCGCACAGATGCTGACAAGGGTGATGCATCAAATGTGAAAAGCAAACATGAACAAAGTGCCCTGTCCAAGTTTGTAAATAAGACAGCTGATGGTGGTATTACTGCCCTTCATATGTCTGCATTAAATGGGTATTTTGATTGCGTACAACTGCTACTTGATCTTAATGCCAATGTGTCTGCTGCTACATTTCATTATGGAACATCATTGGATTTAATAGGGGCTGGAAGCACTCCATTGCATTATGCTGCCTTGTGGGGGCAATTTAAAATGCTGTCAGATCCTCCTCGCGAGAGGTGCAAGTCGGATGGCTTTGAATTGCAATGGGTGGCTTCCTCTTGA 777 0.4762 MGNSFGCSASGERLVSAARDGDLVEAKMLLNFNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRNYCGQTALMQACKYGHWEVVQTLLLFRCNVMRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSAPYEAIHARTDADKGDASNVKSKHEQSALSKFVNKTADGGITALHMSALNGYFDCVQLLLDLNANVSAATFHYGTSLDLIGAGSTPLHYAALWGQFKMLSDPPRERCKSDGFELQWVASS* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0751 258 Gene3D - 143 238 IPR036770 -
Dod06g0751 258 ProSiteProfiles Ankyrin repeat region circular profile. 177 206 - -
Dod06g0751 258 PRINTS Ankyrin repeat signature 112 127 IPR002110 GO:0005515
Dod06g0751 258 PRINTS Ankyrin repeat signature 193 207 IPR002110 GO:0005515
Dod06g0751 258 ProSiteProfiles Ankyrin repeat profile. 111 132 IPR002110 GO:0005515
Dod06g0751 258 SMART ANK_2a 177 206 IPR002110 GO:0005515
Dod06g0751 258 SMART ANK_2a 77 106 IPR002110 GO:0005515
Dod06g0751 258 SMART ANK_2a 111 141 IPR002110 GO:0005515
Dod06g0751 258 SMART ANK_2a 44 73 IPR002110 GO:0005515
Dod06g0751 258 PANTHER E3 UBIQUITIN-PROTEIN LIGASE XBOS32 1 235 - -
Dod06g0751 258 ProSiteProfiles Ankyrin repeat region circular profile. 44 75 - -
Dod06g0751 258 PANTHER HOMEOBOX PROTEIN WARIAI 1 235 - -
Dod06g0751 258 ProSiteProfiles Ankyrin repeat profile. 177 209 IPR002110 GO:0005515
Dod06g0751 258 SUPERFAMILY Ankyrin repeat 14 236 IPR036770 -
Dod06g0751 258 Pfam Ankyrin repeats (3 copies) 175 236 IPR002110 GO:0005515
Dod06g0751 258 ProSiteProfiles Ankyrin repeat profile. 44 76 IPR002110 GO:0005515
Dod06g0751 258 ProSiteProfiles Ankyrin repeat region circular profile. 111 132 - -
Dod06g0751 258 Pfam Ankyrin repeats (many copies) 46 98 IPR002110 GO:0005515
Dod06g0751 258 Pfam Ankyrin repeat 112 130 IPR002110 GO:0005515
Dod06g0751 258 Gene3D - 6 139 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0751 Dod-Chr6 9185383 9187695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0751 3 217 Miscellaneous Gene Families AT3G12360 31.441 1.68e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0751 K19044 - gmx:100793886 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0751 06 9185383 9187695 Dod06g0751 06 9185383 9187695 ECH