Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0731 ATGGGTTGGGGGTTTGAGCCATTTTTATGGGCATTCCTTTCTTGGAGCCTGTTCTTTAATGGCTCATCTTACTCTGAAAAAGTTCCAAGGTACACATTTGTCAAAGAAGCAATTTCTGCTCCACCAATATTATCTTATGACTATATAATCATTGGTGGAGGAACATGTGGGTGTCCACTAGCAGCAACTCTCTCACAAGGTGCAAGAGTTCTAGTCCTTGAAAGGGGAGGCTCACCTTACACCAACCCAGAGCAAATCAACATGAAGAACTTTGTTAGCGCTCTCTCTGACATAAGCCCTTCATCTTTTGCTCAGCAATTCATATCAAGGGATGGTGTCCTCAATGCCAGGGCACGTGTCCTTGGTGGTGGCTCTGTCCTGAATGCAGGGTTCTACTCAAGGGCTAGCTCCGAGTACATAGGGGAATCTGGTTGGAATGAAACTTTGGCTAAGATTTCATATAAGTGGGTTGAGAAGAAGGTGGCTTTCACGCCTCCAATGCTGCAGTGGCAATCAGCAGTGAAGGATGGGCTTTTGGAAGTTGGGGTGTTGCCTTACAATGGTTTTACTCTTGATCACTCGTATGGGACTAAGATTGGAGGCACAATCTTTGATAAGGAGGGTAACAGGCATACTGCTGCTGATTTGTTAGAGTATGCTGATCCAAGGATGATTTCTGTTTATCTGCATGCTACAGTGCACAAGATACTATTTAAGTATAACATAGAAAAAAGAAGGCCCCAAGCTTATGGTGTTATTTTCAATGATGCACTTGGAAAAATTCACAAAGCATACTTAAACAAGAAATCCAGGAATGAGATAATCCTTTCAGCTGGTGCCCTTGGGAGCCCACAGGTGCTGATGCTGAGTGGCATTGGTCCAGCTAGCCATCTTCAGGCTCATGGAATCCAGGTGGTATTGGATCAGCCCTTTGTGGGCCAAGGAATGGCAGATAATCCAATGAACGTTCTAGTGGTTCCTTCCCCTGCACCTGTTGAAGTCGCTCTGATCCAAACTGTGGGCATCACTAAGTTTGGTAGCTTCATTGAAACAGCCAGTGGATTAAGCATAGGCCATTCTTGGTCTGAAAGACTTAAAGGGATTTTTGAATTTGTGTCAAACCAGACTGGCCAACCCTCCAAGTTTCCACCAGAAGCCAAGGAGAGTGTAGCCGATACCATAAGATCTTTAGCCAATTCAACCCTTAAAGGAGGAGTCATACTTGAAAAAATCATAGGTCCACGGTCCACAGGCCATCTAGAGCTCCTAACCACTAATCCTAATGACAACCCGTCAGTTACCTTTAACTATTTCAAAGATCCAGAAGACCTAATGAAGTGTGTTGAAGGCATGAAGACCATCATAAATGTGATAAACTCAAAATCATTCTCAAGGTTCCGCTATCAAAACATGCCGGTCCAAGCTCTCATAGACTTGATGCTGCACATACCACTGAACTTGAGGCCAAAGCATCCTAGTGCTGCCTATTCTTTGGAGCAGTATTGCATAGACACTGTGTTAACAATTTGGCATTACCATGGAGGCTGCCAAGTTGGAAAAGTTGTTGATCATAATTATAAGGTTATAGGTGTGGAAGGTCTGAGAGTAATTGATGGATCAACCTTTTATAGCTCACCAGGGACTAATCCTCAAGCTACTGTTATGATGCTTGGGAGGTATATGGGAGAAAAGATTTTAAAGGAAAGATTCTTCATAGAAAGAAGTGCAGGGATTAATTGA 1740 0.4345 MGWGFEPFLWAFLSWSLFFNGSSYSEKVPRYTFVKEAISAPPILSYDYIIIGGGTCGCPLAATLSQGARVLVLERGGSPYTNPEQINMKNFVSALSDISPSSFAQQFISRDGVLNARARVLGGGSVLNAGFYSRASSEYIGESGWNETLAKISYKWVEKKVAFTPPMLQWQSAVKDGLLEVGVLPYNGFTLDHSYGTKIGGTIFDKEGNRHTAADLLEYADPRMISVYLHATVHKILFKYNIEKRRPQAYGVIFNDALGKIHKAYLNKKSRNEIILSAGALGSPQVLMLSGIGPASHLQAHGIQVVLDQPFVGQGMADNPMNVLVVPSPAPVEVALIQTVGITKFGSFIETASGLSIGHSWSERLKGIFEFVSNQTGQPSKFPPEAKESVADTIRSLANSTLKGGVILEKIIGPRSTGHLELLTTNPNDNPSVTFNYFKDPEDLMKCVEGMKTIINVINSKSFSRFRYQNMPVQALIDLMLHIPLNLRPKHPSAAYSLEQYCIDTVLTIWHYHGGCQVGKVVDHNYKVIGVEGLRVIDGSTFYSSPGTNPQATVMMLGRYMGEKILKERFFIERSAGIN* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0731 579 Pfam GMC oxidoreductase 414 559 IPR007867 GO:0016614
Dod06g0731 579 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 8 569 - -
Dod06g0731 579 SUPERFAMILY FAD-linked reductases, C-terminal domain 316 515 - -
Dod06g0731 579 SUPERFAMILY FAD/NAD(P)-binding domain 44 569 IPR036188 -
Dod06g0731 579 ProSitePatterns GMC oxidoreductases signature 2. 279 293 IPR000172 GO:0016614|GO:0050660
Dod06g0731 579 PIRSF Alcohol_oxidase 30 574 IPR012132 GO:0050660
Dod06g0731 579 Pfam GMC oxidoreductase 46 320 IPR000172 GO:0016614|GO:0050660
Dod06g0731 579 Gene3D - 46 558 IPR036188 -
Dod06g0731 579 PANTHER OSJNBA0019K04.7 PROTEIN 8 569 - -
Dod06g0731 579 Gene3D - 163 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0731 Dod-Chr6 8844110 8847538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0731 9 569 Miscellaneous Gene Families AT5G51950 61.053 0.0 710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0731 - - gmx:100780453 964.526
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0731 06 8844110 8847538 Dod06g0731 06 8844110 8847538 ECH