Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0716 ATGGCTTTCTCTTGTAGGCTTGAGAACTTCATCCTTTCTTCTTCCTTCAAACCCAAAAGCTCCTTTGTCCAATCATCCATCAACCCTTCATCGTTTCTCTCGTGTCCTCCTTCTCCTTTCAAACATCAAAAGCTAATTCCCTTCAGAATCCGCCATGCTCCAACTGTAAGAGCCACATCATCATCATCTCCTGCAACCATTGCCGAGCCTGAAGGCATTAAGATTGACTCGATTCCAACCAAACCTTTCGAAGGACAAAAGACGGGTACCAGTGGACTCAGAAAGAAGGTGAAAGAGTTTATGCAAGAAAACTACCTCGCAAATTGGATACAGGCACTGTTTAATTCCTTGCCTCCAGAGGATTACAAGAATGGTTTACTGGTGTTGGGAGGTGATGGTCGATACTTTAATAGGGAAGCTGCGCAGATAATAATCAAAATTGCTGCTGGAAATGGTGTTGGAAAAGTTTTGGTTGGAAAGGAAGGTATATTGTCAACCCCAGCTGTTTCAGCTGTGATAAGGAAGTGGAAGGCAAATGGTGGATTCATTATGAGTGCAAGCCATAATCCTGGAGGGCCTGAATATGATTGGGGTATTAAGTTTAATTACAGCAGTGGACAACCTGCACCAGAATCCATCACCAACAAGATTTATGGAAACACCCTATCTATATCTGAGATAAAGATCGCTGACATTCCCGATGTTGACTTATCAAATGTTGGGGTGACAAAGCATGGAAGCTTCAGTGTAGAAGTAATAGACCCAGTTTCTGACTATTTGGAGCTATTGGAGACAGTATTTGATTTTCAGCTAATCAAGGGTCTTATTTCACGGCCAAATTTTAGGTTCATATTTGACGCCATGCATGCAGTTACTGGTGCTTATGCCAAACCTATCTTTGTTGATAAACTTGGTGCTGGTCCGGATTCGATTGCAAATGGAATTCCTTTGGAAGATTTTGGATATGGTCATCCTGATCCTAATCTAACATATGCAAAGGATCTTGTCAACATATTGTATGCTGAAAATGGTCCTGATTTTGGAGCTGCTAGTGATGGTGACGGTGATAGAAATATGATTTTAGGAAGAAGTTTCTTTGTAACTCCTTCAGACTCGGTAGCAGTTATTGCAGCCAATGCAAGAGAAGCAATTCCGTACTTCAAGAACGGTGTTAAGGGTCTTGCGAGATCAATGCCAACAAGTGGTAGTCTGGATCGTGTCGCAGAAAAATTGAACCTTCCTTTCTTTGAGGTCCCCACTGGTTGGAAATTTTTTGGGAATCTTATGGATGCTGGGAAATTGTCAGTTTGCGGGGAAGAGAGTTTTGGAACAGGTTCTGACCACATTCGTGAGAAGGATGGCATCTGGGCTGTCTTGGCATGGCTTTCTATTATTGCGCACCGCAGCAAAGACAAGAGACCAGGGGAGAAATTGATCTCTGTAGCTGATGTTGTGAAGGAGCACTGGGCAACTTATGGAAGAAATTTTTTTTCAAGATATGACTATGAGGAATGTGAGTCTGAAGGTGCCAATACGATGATAGAATACCTACGAGAGACTGTGTCTGAGAGCAAGCCCGGCGATAAGTATGGAAGTTATGTCCTCCAGTTTGCAGATGATTTTACATACACTGATCCTGTGGATGGAAGTATGGTATCAAAACAAGGTGTTCGGTTTGTTTTCACGGATGGTTCAAGGATTATATATCGTTTATCAGGAACGGGTTCTGCGGGTGCTACTGTTAGAGTTTACATTGAACAGTTTGAATCTGATGTCTCAAAACATGATCTTGATGCTCAAGTTGTCTTAAAACCATTAATAGATTTAGCACTATCAGTGTCAAAGCTCAAAGACTTCACGGGAAGGGAGAAGCCCACAGTCATCACATAA 1890 0.4217 MAFSCRLENFILSSSFKPKSSFVQSSINPSSFLSCPPSPFKHQKLIPFRIRHAPTVRATSSSSPATIAEPEGIKIDSIPTKPFEGQKTGTSGLRKKVKEFMQENYLANWIQALFNSLPPEDYKNGLLVLGGDGRYFNREAAQIIIKIAAGNGVGKVLVGKEGILSTPAVSAVIRKWKANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITNKIYGNTLSISEIKIADIPDVDLSNVGVTKHGSFSVEVIDPVSDYLELLETVFDFQLIKGLISRPNFRFIFDAMHAVTGAYAKPIFVDKLGAGPDSIANGIPLEDFGYGHPDPNLTYAKDLVNILYAENGPDFGAASDGDGDRNMILGRSFFVTPSDSVAVIAANAREAIPYFKNGVKGLARSMPTSGSLDRVAEKLNLPFFEVPTGWKFFGNLMDAGKLSVCGEESFGTGSDHIREKDGIWAVLAWLSIIAHRSKDKRPGEKLISVADVVKEHWATYGRNFFSRYDYEECESEGANTMIEYLRETVSESKPGDKYGSYVLQFADDFTYTDPVDGSMVSKQGVRFVFTDGSRIIYRLSGTGSAGATVRVYIEQFESDVSKHDLDAQVVLKPLIDLALSVSKLKDFTGREKPTVIT* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0716 629 SUPERFAMILY Phosphoglucomutase, first 3 domains 75 287 IPR016055 GO:0005975|GO:0016868
Dod06g0716 629 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 258 361 IPR005845 GO:0005975
Dod06g0716 629 SUPERFAMILY Phosphoglucomutase, first 3 domains 257 366 IPR016055 GO:0005975|GO:0016868
Dod06g0716 629 ProSitePatterns Phosphoglucomutase and phosphomannomutase phosphoserine signature. 181 190 IPR016066 GO:0000287
Dod06g0716 629 Gene3D - 366 464 - -
Dod06g0716 629 PANTHER PHOSPHOGLUCOMUTASE, CHLOROPLASTIC 52 629 - -
Dod06g0716 629 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 86 225 IPR005844 GO:0005975|GO:0016868
Dod06g0716 629 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 369 492 IPR005846 GO:0005975|GO:0016868
Dod06g0716 629 Gene3D - 475 629 - -
Dod06g0716 629 Gene3D - 263 365 - -
Dod06g0716 629 Pfam Phosphoglucomutase/phosphomannomutase, C-terminal domain 553 604 IPR005843 GO:0016868|GO:0071704
Dod06g0716 629 PRINTS Phosphoglucomutase/phosphomannomutase family signature 180 194 IPR005841 GO:0005975|GO:0016868
Dod06g0716 629 PRINTS Phosphoglucomutase/phosphomannomutase family signature 316 329 IPR005841 GO:0005975|GO:0016868
Dod06g0716 629 PRINTS Phosphoglucomutase/phosphomannomutase family signature 345 360 IPR005841 GO:0005975|GO:0016868
Dod06g0716 629 PRINTS Phosphoglucomutase/phosphomannomutase family signature 280 299 IPR005841 GO:0005975|GO:0016868
Dod06g0716 629 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 52 629 IPR045244 GO:0004614|GO:0005975
Dod06g0716 629 CDD PGM1 78 629 - -
Dod06g0716 629 SUPERFAMILY Phosphoglucomutase, C-terminal domain 494 629 IPR036900 GO:0016868|GO:0071704
Dod06g0716 629 SUPERFAMILY Phosphoglucomutase, first 3 domains 353 499 IPR016055 GO:0005975|GO:0016868
Dod06g0716 629 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Dod06g0716 629 Gene3D - 74 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0716 Dod-Chr6 8656993 8665824 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0716 K01835 - gmx:100802730 1120.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0716 06 8656993 8665824 Dod06g0716 06 8656993 8665824 ECH