Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0704 ATGTTTCATTTTCTGCTTCCATGTTCTCTCCTTCTTTGTTTCCTTCTCAAGCACTTGCTTTCAAGGCCCTCTCCTATCTACCTTGTTGACTTCTCATGCCTCAAACCACCAAGCTATTGCAGGGTACCATTCTCAAAGTTCCTTGAGAACGCTTCCAAGTTTGAAGTCTTTGACAAAGAGAGCCTAGATTTCATGTCCAGAGTGCTCCACTCTTCAGGACAAAGTAAAGAGACTTATCTCCCCCCTGCCCTACACTACATTCCTCCAAAGACGCACCAAAATGAATCCATCAAAGAGGTGCACATGGTTCTCCTCCCCATCATGGACGACCTTCTAGCAAAATCCAATGTTTCACCTCTTGACATAGACATACTCATCCTAAACTGCAGTGGCTTTTGCCCCTCACCTTCTTTAGCCTCCATTGTCATCAACAGGTACTCCATGAGGAGTGACATCAAGAGCTACAACATCTCTGGCATGGGGTGCAGTGCAAGTGCGCTCTGCATAGACATGGCTCATGACCTTCTGAGAGTTCACAAGAACTCCAATGCCATGGTTCTCAGCACAGAGATTCTGTCAACAGGTTGGTATTCAGGTAATGAAAAGTCCAAGTTGCTGATAAACTGCCTCTTCAGGATGGGAAGTGCAGCTATTCTTCTCTCAAACAAGAAAGAAGCAAAGAAGCATGCAAAATACAGGTTGGTTAGGACATTAAGAACACAAAGAGCCTTTGATGACAAGGCTTATCTTTCTGCCATAAGGGAAGAAGATTCAGAAGGGAAACTTGGGGTGACACTAAAGAGGGACTTGCTTCAGGTAGCTGGTGAAACCCTTCGTTCAAACATCTCCATTTTAGGTACTGAAATCTTGCCACTTTCAGAAAAGTTTTGGTATGGTGTGTCCTTGATAAAGAAGAGGTTTATAAAATCTGAGGGGATTTATGTCCCAAATTTCAAGACTGTGATACAGCATTTCTGCATGCCATGTTCAGGGAGGGCAGTGATAAGGGAAGTAGGGAAAGGGTTGAAGCTAGGGGAGAGAGACACTGAACCTGCATTGATGACACTGCACAGGTTTGGGAACCAGTCTTCTTCCTCACTGTGGTACGAACTGGCTTACTTGGAAGCCAAGGAAAGAGTGCAGAAAGGTGACAAGATTTGGCTGCTTGGTATGGGGAGTGGGCCCAAGTGCAACAGTGTGGTTTTGAAGTGTGTTAGGCCCATACTTGGAGAGCCCAATAAGGGCCCATGGGCTGACTGCATCCACCGATACCCAGTATTAGCAGTGGATTAA 1293 0.4548 MFHFLLPCSLLLCFLLKHLLSRPSPIYLVDFSCLKPPSYCRVPFSKFLENASKFEVFDKESLDFMSRVLHSSGQSKETYLPPALHYIPPKTHQNESIKEVHMVLLPIMDDLLAKSNVSPLDIDILILNCSGFCPSPSLASIVINRYSMRSDIKSYNISGMGCSASALCIDMAHDLLRVHKNSNAMVLSTEILSTGWYSGNEKSKLLINCLFRMGSAAILLSNKKEAKKHAKYRLVRTLRTQRAFDDKAYLSAIREEDSEGKLGVTLKRDLLQVAGETLRSNISILGTEILPLSEKFWYGVSLIKKRFIKSEGIYVPNFKTVIQHFCMPCSGRAVIREVGKGLKLGERDTEPALMTLHRFGNQSSSSLWYELAYLEAKERVQKGDKIWLLGMGSGPKCNSVVLKCVRPILGEPNKGPWADCIHRYPVLAVD* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0704 430 Pfam FAE1/Type III polyketide synthase-like protein 20 306 IPR013601 GO:0006633|GO:0016020|GO:0016747
Dod06g0704 430 SUPERFAMILY Thiolase-like 16 226 IPR016039 GO:0016746
Dod06g0704 430 CDD CHS_like 22 402 - -
Dod06g0704 430 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 322 403 IPR013747 -
Dod06g0704 430 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 430 IPR012392 GO:0006633|GO:0016020|GO:0016747
Dod06g0704 430 PANTHER 3-KETOACYL-COA SYNTHASE 2 428 - -
Dod06g0704 430 SUPERFAMILY Thiolase-like 211 406 IPR016039 GO:0016746
Dod06g0704 430 Gene3D - 47 404 IPR016039 GO:0016746
Dod06g0704 430 PANTHER 3-KETOACYL-COA SYNTHASE 2 428 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0704 Dod-Chr6 8513554 8514846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0704 1 427 Miscellaneous Gene Families AT1G25450 48.832 1.44e-153 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0704 K15397 - gmx:100818350 741.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0704 06 8513554 8514846 Dod06g0704 06 8513554 8514846 ECH