Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0528 ATGAACAACTTTCACAAGGCACTTATCTTCCTGGCTGGGTTTGTTTCCACGAGTTTTTTCCAAGTTTCAGTTGCATCTGTTGTTTCATCAGGTGACTTCAATAAGGACTTCTTTGTGTTATGGTCTCCTACCCATGTAAACACATCTGCTGATGGACAGACAAGAAGCTTGAAGTTGGATCAACAATCTGGGGCTGGTTTTGCTTCGAACCAGATGTTTTTGTTTGGGCAAATTGACATGCAAATCAAACTAGTACCAGGTCATTCTGCAGGCACAGTCCTGGCCTACTATCTGACCTCTGATCAACCCAATCGTGATGAGATCGACTTTGAGTTTCTTGGAAATGTCTCTGGGCAGCCTTATATTCTTCAAACGAATATTTTCGCAGATGGGTCTGACAATAGAGAGGAGAGGATTTATCTTTGGTTTGATCCCACGAAGGACTTCCACACTTATTCAGTGTTGTGGAATCTGCACCAGATTGTGTTCATGGTGGATAGCATTCCAATAAGAGTGTACAGAAACCATGCAGACAAGGGAGTGCCATTTCCAAGATGGCAGCCAATGAGTCTAAAAGCGACCCTGTGGAATGGTGATAGCTGGGCAACACGAGGAGGGCAAGATAAGATTGACTGGACAAAGGGTCCCTTCTTAGCTTCATTCAGGAATTACAAGATTGATGCTTGTGTGTGGAAAGGGAATCCAAGGTTTTGCAGGGCAGCTAGCCATACCAATTGGTGGAACCAAAACAACTTTAGCTCACTGACATCGGCACAAAGAAGGTGGTTCAAATGGGTCAGGAAATACCACATGATTTATGACTACTGCCAAGATAATGAGAGGTTCCAAAACAATCTTCCAGAGGAATGCTCCCTTCCCAAGTATCGACCAGAAAGGATGGTGATTACTTTGTTTTCCTTTTGGTTTCAATTTCAGATATGCTGTTAA 948 0.4325 MNNFHKALIFLAGFVSTSFFQVSVASVVSSGDFNKDFFVLWSPTHVNTSADGQTRSLKLDQQSGAGFASNQMFLFGQIDMQIKLVPGHSAGTVLAYYLTSDQPNRDEIDFEFLGNVSGQPYILQTNIFADGSDNREERIYLWFDPTKDFHTYSVLWNLHQIVFMVDSIPIRVYRNHADKGVPFPRWQPMSLKATLWNGDSWATRGGQDKIDWTKGPFLASFRNYKIDACVWKGNPRFCRAASHTNWWNQNNFSSLTSAQRRWFKWVRKYHMIYDYCQDNERFQNNLPEECSLPKYRPERMVITLFSFWFQFQICC* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0528 315 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 17 221 IPR000757 GO:0004553|GO:0005975
Dod06g0528 315 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 4 293 IPR044791 GO:0004553
Dod06g0528 315 PIRSF EndGlu_transf 2 295 IPR016455 GO:0010411|GO:0016762|GO:0042546
Dod06g0528 315 ProSitePatterns Glycosyl hydrolases family 16 active sites. 107 117 IPR008263 GO:0004553|GO:0005975
Dod06g0528 315 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 10-RELATED 4 293 - -
Dod06g0528 315 Gene3D - 19 294 - -
Dod06g0528 315 Pfam Glycosyl hydrolases family 16 34 214 IPR000757 GO:0004553|GO:0005975
Dod06g0528 315 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 242 290 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Dod06g0528 315 CDD GH16_XET 31 290 IPR016455 GO:0010411|GO:0016762|GO:0042546
Dod06g0528 315 SUPERFAMILY Concanavalin A-like lectins/glucanases 32 294 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0528 Dod-Chr6 6377072 6378840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0528 69 295 Glycoside Hydrolase AT2G14620 75.330 1.52e-136 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0528 K08235 - gmx:100783152 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0528 06 6377072 6378840 Dod06g0528 06 6377072 6378840 ECH