Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0520 ATGTCCAATAATCCGCAATATCCAGGTTTACAGCCTCTTCGCCCTCCTGGGCCTCCAATTGCTGCTTCAATGGATCCTCAACGCAATTTTGCTCCACCACCGCCGATGCCTGTTCAATTCCGTCCTGTGGTTCCTACTCAGCCACCACAGCAGTTCATTCCCGTGCCTTCTCAACATTACCAACCTGTTGGTCCTGGTGTTCCACTGATTAATGTTGGACTGCCTCCTCAAAATCAACAACCCCAATTTACTCAGCCAATTCAACAGTTACATCCAAGACCTACGCAGCAGCTGCAAATGCCACCACAGGCAGTTCCATTGCCAGTTGCGCGGCCTGATTCTCAAGCTCCAAATGGCTATGCACCAAGTTTAGGTGGCTCAGTCATACCAATCTCTGCATCATATACGTTTGCACCGTCTTCATATGGTCAAGTGCAAACTAATTTTAGTTCTACTGGCCAATACCAGCCTGCTTCTCAAAACCAAGCTTCGACTGGTTCATCATCCCTGAGCCTTACCTCTGGTGCAAATCTCCAGAGCAATGGTGAAAAACCTTCAATTACAACAGTCACAACTTCAGAAACCAGTGTTCGGCCTTACCTTGCCAAGGATGGCTCCACTGATTGGATTGAGCATACTTCTGCTAATGGAAGAAGATTTTACTACAATAGGAAGACTAAAGTATCTACCTGGGAGAAGCCTTTGGAATTGATGACACCAACTGAGAGGGTGGATGCAACAACAAACTGGAAGGAGTATACTAGTCCTGATGGAAGGAAGTATTACTACAACAAGGTCACCAAGGAATCAAAGTGGTCCATTCCCGAGGAACTGAAGTTGGCCCGTGAGCAAGTTGAAAAGGCAACTGTCCATGGAACACGTCCTGTTGCTTTACTGAATTCTCATGCTCAACCCTCTTCAACACCGTCTGTGGTTGAAACAACACCAAATGCAGATATTTCATCTTTAACTGGTCGAGGAGAACTATCAAGTCCCGTTTCAGTTGCTCCTCTTGTTACTACATCTGCAAGTAATCTACAATCTGAGATGACATCTGGACCATCTGCCTCTCCTTCTGTGGCCCCTATAACTGGAATAAAAGTGGATGAAAGTGAGGCACCTGTAAATACTGTCACAACATCTGATGCTGGTGCAGGAAGTGATAGGGTTACTGTTACTGATCTTAATACAGCTAGGATACCAATGAATGATGTCAACAACTTTTCAGCAAAGGATACACTAGGCTCTGCAGATGGAGTTCCAGCAGAAGATAAAGAAGATGGTAAAAATGATTCAGTAGCAGAGAAAATTAATAATGTGGCATCAGAAACAAAGGCGGATGTATCTTCAGAAACCAAGGCAGATGTGTCTTCAGAAACTAAGGCAGATGTAGCTTCAGAAACTAAGGCAGATGTAGCTTCAGAAACTAAGGCAGATATAGCTTCAGAAATGAAGGCAGATGTAGCTTCAGAAGCAAAGGCACCTGAGCCAGAACCCTTAGTTTATGCGAATAAGATGGAGGCTAAAGATGCATTCAAAGCGCTCTTGGAGTCTGTAAATGTTGGATCTGACTGGACTTGGGATCGAGCAATGCGATTAATAATTAATGATAAAAGGTATGGTGCATTGAAAACACTTGGAGAAAGGAAACAAGCTTTCAATGAGTACTTAAATCAGAGGAAAAAACAGGAAGCAGAAGAAAAGCGTATGAAACAGAAAAAAGCACGGGAGGATTTTAGGAAGATGTTAGAAGAGTCCACAGAGCTGACTTCATCCACTAGATGGAGCAAAGCAGTGTCAATATTTGAAAATGATGAACGTTTCAAGGCTGTTGAGCGTGACAGAGATCGCAGGGATATGTTTGATAGCTTCTTGGAGGAACTTATAAACAAGGAACGAGCAAGGGCGCAAGAGGAACGAAAGAAGAATATAATGGAATACAGGAAGCTTCTGGAATCTTGTGACTTTATAAAAGCTAGCATGCAGTGGCGAAAAGTTCAAGACCGATTAGAGGCTGATGAAAGATGTTCTCGTCTTGAGAAAATTGACCGCTTGGAAATATTCCAAGAATATTTACATGACTTAGAGAAGGAAGAGGAAGAGCAGAAGAAGATACAGAAGGAGGAATTGAGAAAGACAGAACGTAAAAACCGTGACGAATTCCGCAAATTGATGGAAGAACATATTGCTGCAGGCATTCTTACACCAAAAACTCACTGGCGTGATTATTACTCAAAGGTGAAAGAGTTACCTGCTTATCTGGCAGTGGCATCAAACACCTCAGGTTCAACTCCAAAAGACTTGTTTGAAGATGTTGCTGAAGAGCTAGAGAAACAATATCTTGAAGACAAAAGTCGAATAAAAGATGCAGTGAAGTTGGCAAAGATCACACTGTCGTCAACCTACACTTTTGAGGACTTCAAATCAGTTATCTCAAAAGACGTTGGCTCTCCACCTATATCTGATTCCAACTTAAAGCTAGTGTTTGATGAGCTACTAGAGCGGGCTAGGGAGAAGGAGGAGAAGGAGGCTAAGAAACTTAAACGTCTTGCCGACGATTTCATTCGTCTACTATATTCTACTAAGGACATTACTGCATCTTCAAAATGGGAGGACTGTAGACCACATATTGAAGAAAGTCAAGAGTACAGATCTGTTGGAGATGAGAACCGTTGCAAAGAAATATTTGAGGAACACATGTCACAACTTAAAGAAGAGGCAAAGGAGAATGAGCGGAAACGAAAAGAGGAAAGGGCAAAGAAGGAAAAAGATAGGGAGGAAAGGGAACGGAAAAAAGCAAAGCAAAGAAGGGAAAAAGAGGGAGGGCGTGAAAGAGAGAAACAGAAGGATAAAGCAGATAGCGACAGCCAGGACTTAACGGAGACCCAATCCTCCAAAGACAACAAAAGGTTAGACAGTGATGGTAGAAAACAAAGAAAGCATCACCAAAGTCCTGAGCATATTTCTCATGAAACGGACAAAGAGAGGACCAAGAAATCTCATGGACATAGTAGCGACCGCAAGAAATCAAGACGACATGCATCTGGTCATGAATCTGATGAAAGCCGGCACAAGAGACACAAGAGAGAACACCGCAGTGATTCTCATAGAGAAGGTGGCCATGCAGCAGAATTTGAAGATGCGGAATATGGTAAAGATGTGGATAGATGGTAG 3174 0.4301 MSNNPQYPGLQPLRPPGPPIAASMDPQRNFAPPPPMPVQFRPVVPTQPPQQFIPVPSQHYQPVGPGVPLINVGLPPQNQQPQFTQPIQQLHPRPTQQLQMPPQAVPLPVARPDSQAPNGYAPSLGGSVIPISASYTFAPSSYGQVQTNFSSTGQYQPASQNQASTGSSSLSLTSGANLQSNGEKPSITTVTTSETSVRPYLAKDGSTDWIEHTSANGRRFYYNRKTKVSTWEKPLELMTPTERVDATTNWKEYTSPDGRKYYYNKVTKESKWSIPEELKLAREQVEKATVHGTRPVALLNSHAQPSSTPSVVETTPNADISSLTGRGELSSPVSVAPLVTTSASNLQSEMTSGPSASPSVAPITGIKVDESEAPVNTVTTSDAGAGSDRVTVTDLNTARIPMNDVNNFSAKDTLGSADGVPAEDKEDGKNDSVAEKINNVASETKADVSSETKADVSSETKADVASETKADVASETKADIASEMKADVASEAKAPEPEPLVYANKMEAKDAFKALLESVNVGSDWTWDRAMRLIINDKRYGALKTLGERKQAFNEYLNQRKKQEAEEKRMKQKKAREDFRKMLEESTELTSSTRWSKAVSIFENDERFKAVERDRDRRDMFDSFLEELINKERARAQEERKKNIMEYRKLLESCDFIKASMQWRKVQDRLEADERCSRLEKIDRLEIFQEYLHDLEKEEEEQKKIQKEELRKTERKNRDEFRKLMEEHIAAGILTPKTHWRDYYSKVKELPAYLAVASNTSGSTPKDLFEDVAEELEKQYLEDKSRIKDAVKLAKITLSSTYTFEDFKSVISKDVGSPPISDSNLKLVFDELLERAREKEEKEAKKLKRLADDFIRLLYSTKDITASSKWEDCRPHIEESQEYRSVGDENRCKEIFEEHMSQLKEEAKENERKRKEERAKKEKDREERERKKAKQRREKEGGREREKQKDKADSDSQDLTETQSSKDNKRLDSDGRKQRKHHQSPEHISHETDKERTKKSHGHSSDRKKSRRHASGHESDESRHKRHKREHRSDSHREGGHAAEFEDAEYGKDVDRW* 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0520 1057 CDD WW 207 236 IPR001202 GO:0005515
Dod06g0520 1057 ProSitePatterns WW/rsp5/WWP domain signature. 209 234 IPR001202 GO:0005515
Dod06g0520 1057 SUPERFAMILY WW domain 237 278 IPR036020 GO:0005515
Dod06g0520 1057 Pfam FF domain 574 622 IPR002713 -
Dod06g0520 1057 Pfam FF domain 646 691 IPR002713 -
Dod06g0520 1057 Pfam FF domain 852 899 IPR002713 -
Dod06g0520 1057 Pfam FF domain 716 771 IPR002713 -
Dod06g0520 1057 Pfam FF domain 507 556 IPR002713 -
Dod06g0520 1057 ProSiteProfiles FF domain profile. 572 627 IPR002713 -
Dod06g0520 1057 MobiDBLite consensus disorder prediction 448 470 - -
Dod06g0520 1057 MobiDBLite consensus disorder prediction 897 1000 - -
Dod06g0520 1057 SUPERFAMILY FF domain 707 780 IPR036517 -
Dod06g0520 1057 SUPERFAMILY FF domain 498 560 IPR036517 -
Dod06g0520 1057 SMART ww_5 204 236 IPR001202 GO:0005515
Dod06g0520 1057 SMART ww_5 245 277 IPR001202 GO:0005515
Dod06g0520 1057 ProSiteProfiles FF domain profile. 712 775 IPR002713 -
Dod06g0520 1057 SUPERFAMILY WW domain 208 242 IPR036020 GO:0005515
Dod06g0520 1057 ProSiteProfiles WW/rsp5/WWP domain profile. 203 236 IPR001202 GO:0005515
Dod06g0520 1057 SUPERFAMILY FF domain 637 701 IPR036517 -
Dod06g0520 1057 MobiDBLite consensus disorder prediction 418 433 - -
Dod06g0520 1057 SMART FF_2 640 694 IPR002713 -
Dod06g0520 1057 SMART FF_2 847 902 IPR002713 -
Dod06g0520 1057 SMART FF_2 572 627 IPR002713 -
Dod06g0520 1057 SMART FF_2 505 559 IPR002713 -
Dod06g0520 1057 SMART FF_2 714 775 IPR002713 -
Dod06g0520 1057 ProSiteProfiles FF domain profile. 837 902 IPR002713 -
Dod06g0520 1057 Coils Coil 830 857 - -
Dod06g0520 1057 Coils Coil 893 943 - -
Dod06g0520 1057 CDD WW 248 277 IPR001202 GO:0005515
Dod06g0520 1057 ProSiteProfiles FF domain profile. 640 694 IPR002713 -
Dod06g0520 1057 ProSiteProfiles FF domain profile. 505 559 IPR002713 -
Dod06g0520 1057 Coils Coil 773 793 - -
Dod06g0520 1057 PANTHER PRE-MRNA-PROCESSING PROTEIN PRP40 2 446 IPR039726 GO:0045292
Dod06g0520 1057 SUPERFAMILY FF domain 566 633 IPR036517 -
Dod06g0520 1057 Coils Coil 688 727 - -
Dod06g0520 1057 MobiDBLite consensus disorder prediction 1011 1057 - -
Dod06g0520 1057 Gene3D FF domain 842 914 IPR036517 -
Dod06g0520 1057 MobiDBLite consensus disorder prediction 1 60 - -
Dod06g0520 1057 MobiDBLite consensus disorder prediction 897 1057 - -
Dod06g0520 1057 Gene3D FF domain 505 560 IPR036517 -
Dod06g0520 1057 Gene3D - 246 289 - -
Dod06g0520 1057 SUPERFAMILY FF domain 840 909 IPR036517 -
Dod06g0520 1057 MobiDBLite consensus disorder prediction 406 470 - -
Dod06g0520 1057 PANTHER PRE-MRNA-PROCESSING PROTEIN 40B 2 446 - -
Dod06g0520 1057 PANTHER PRE-MRNA-PROCESSING PROTEIN 40B 445 1051 - -
Dod06g0520 1057 MobiDBLite consensus disorder prediction 299 330 - -
Dod06g0520 1057 Pfam WW domain 249 275 IPR001202 GO:0005515
Dod06g0520 1057 Pfam WW domain 208 234 IPR001202 GO:0005515
Dod06g0520 1057 Coils Coil 553 582 - -
Dod06g0520 1057 ProSiteProfiles WW/rsp5/WWP domain profile. 244 277 IPR001202 GO:0005515
Dod06g0520 1057 PANTHER PRE-MRNA-PROCESSING PROTEIN PRP40 445 1051 IPR039726 GO:0045292
Dod06g0520 1057 MobiDBLite consensus disorder prediction 9 52 - -
Dod06g0520 1057 Gene3D - 191 245 - -
Dod06g0520 1057 MobiDBLite consensus disorder prediction 151 193 - -
Dod06g0520 1057 Gene3D FF domain 705 787 IPR036517 -
Dod06g0520 1057 Gene3D FF domain 634 704 IPR036517 -
Dod06g0520 1057 Gene3D FF domain 561 633 IPR036517 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0520 Dod-Chr6 6289582 6302488 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0520 K12821 - gmx:100796870 1346.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0520 06 6289582 6302488 Dod06g0520 06 6289582 6302488 ECH