Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0504 ATGGAGCTATCTCTGATTGGCCTTCAGAATGCTGGGAAAACTTCCCTTGTAAATGTTATTGCTGTATGTAACTTGACCTTCTACATGAGTACTTTTTTTTCCCCGTATTTTACGTCTTCTTTGATTGCCATGCTGATTCTGAGTTTATGTTTGTTTCTGCTCAAGACTGGTGGATTTAGTGAAGACATGATCCCTACGGTAGGATTTAATATGAAAAAGGTAACTAAAGGGAGTGTGACAATAAAGTTGTGGGACCTTGGAGGTCAACCAAGGTTTCGCAGTATGTGGGAGAGATACTGCCGTGCTGTTTCAGCTATTGTTTATGTAGTTGATGCAGCTGATAATGACAATTTACCTGTCTCTAGAGGTGAACTTCATGACCTGTTGAGCAAACCTTCTTTAAATGGTATTCCACTGCTGGTTCTGGGTAATAAGATTGACAAACCAGGGGCCTTGTCTGAGCAAGACCTAATGGAACAGATGGGACTGAAATCAATCGGTGAAAGAGAAGTTTGTTGCTTCATGATATCGTGTAAAAATTCCACCAACATTGACACAGTTGTTGATTGGCTTGTAAAACATTCTAAATCAAAGAATTGA 600 0.3967 MELSLIGLQNAGKTSLVNVIAVCNLTFYMSTFFSPYFTSSLIAMLILSLCLFLLKTGGFSEDMIPTVGFNMKKVTKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADNDNLPVSRGELHDLLSKPSLNGIPLLVLGNKIDKPGALSEQDLMEQMGLKSIGEREVCCFMISCKNSTNIDTVVDWLVKHSKSKN* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0504 199 Gene3D - 1 199 IPR027417 -
Dod06g0504 199 ProSiteProfiles small GTPase SAR1 family profile. 5 199 - -
Dod06g0504 199 PRINTS Transforming protein P21 ras signature 1 17 - -
Dod06g0504 199 PRINTS Transforming protein P21 ras signature 173 195 - -
Dod06g0504 199 PRINTS Transforming protein P21 ras signature 135 148 - -
Dod06g0504 199 PRINTS Transforming protein P21 ras signature 72 94 - -
Dod06g0504 199 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 197 IPR027417 -
Dod06g0504 199 SMART rab_sub_5 51 198 - -
Dod06g0504 199 SMART arf_sub_2 25 199 - -
Dod06g0504 199 PANTHER ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 8 1 24 - -
Dod06g0504 199 PANTHER ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 8 28 199 - -
Dod06g0504 199 PANTHER ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 8A 1 24 - -
Dod06g0504 199 PANTHER ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 8A 28 199 - -
Dod06g0504 199 TIGRFAM small_GTP: small GTP-binding protein domain 53 191 IPR005225 GO:0005525
Dod06g0504 199 ProSiteProfiles small GTPase Arf family profile. 1 195 - -
Dod06g0504 199 Pfam ADP-ribosylation factor family 55 193 IPR006689 GO:0003924|GO:0005525
Dod06g0504 199 CDD Arl10_like 2 194 IPR044154 GO:0003924|GO:0005525|GO:0015031
Dod06g0504 199 ProSiteProfiles small GTPase Rab1 family profile. 12 199 - -
Dod06g0504 199 SMART sar_sub_1 25 195 IPR006689 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0504 Dod-Chr6 6090126 6093291 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0504 K07955 - jre:108979721 294.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0504 06 6090126 6093291 Dod06g0504 06 6090126 6093291 ECH