Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0502 ATGAAGCAAGGCTGCAAGTTATTGTTCACCACGACTTTGCTTTTACTGATCTCAGCTTACTGTGTTTACAATTCATTGATCAAGCAGTGCGTGGCAGAAACCCCGAAAGCTCAGTATGGAGGAGGCATCATAGTAAATCCAGGATTTGACCACAACATAGAGGGTTGGACAGTGTTTGGAAAAGGAGCAATCGGGGAAAGAGTATCGAATGAAGGCAATAGATTCATTGTTGCCCTCAACAGAACACAACCATTAGATAGTTTCTCTCAGAAGGTCCAACTTAAGAAAGGAGTGATCTACACCTTTTCTGCTTGGTTTCAGGTCAGTGAAGGAAGTGAGACTCTGTCAGTTATATTTAAAACTGATGGAAGTGAACTGATACGAGGTGGCCATGTGATAGCAAAGCACGGATGCTGGACCTTGTTAAAAGGTGGCATAGTTGCAAACTACTCAAGCCCTGCTGAGATTGTTTTTGAGAGCCAGAATTCAACGGTGGAAATATGGGCTGACAGTGTTTCCTTACAACCATTCACCAAAGAGCAATGGAGATCACATCAGGACGAGAGCATTGAGAGGGTACGTAAGACCAAGGTGAGATTCCAAATAACTCACGTAAATGAAACAGCATTGGAAGGAGCAAGTGTCTTCATCAAGCAAACAAGGTCTGATTTCCCATTTGGATGTGGAATGAACTACCACATTCTCACAAGCACTGATTACCAGAGTTGGTTTGCATCAAGATTCAAATATACAACTTTCACCAATGCCATGAAGTGGTATAGCACAGAGGTAAAGCAAGGCCAAGAGAACTACACTATCCCAGATGCCATGCTGGAATTCACCAAAGAGAATGGCATTTGTGTCAGAGGTCATAACATTTTCTGGGACAACAAAAAAATGCAGCCTGAATGGGTCAAGTGCCTCTCTCCTGATGAATTAAGAGAAGCAGCAGCAAAAAGAATAAATTCTGTGGTTACAAGATACAAAGGAGAACTCATAGCATGGGATGTGGTGAATGAGAATCTCCACTTCAGGTTCTTTGAGGACAACCTTGGTGAGAATGCTTCAGCACAATATTTTTATACAGCTTACGAGCTTGATCAAAAACCACTCTTGTTCCTGAATGAGTATAACACAATTGAAGATAGCGGGGATAGGGCTGCCTGCCCGGCCAACTATATTAAGAAAGTTGAGGAGATTCTGTCATATCCAGGTAATGAAGGGATATTAGCAGCAATAGGGTTGCAAGGCCATTTTTCTGCTGGCCAGCCAAATATTGCTTACATGAGGGCTGGTCTAGATGCTCTTGATACTACTGGTCTTCCATTATGGCTCACAGAAGTGAGCGTGGCTCCGGACCCAAATCAGGCAGAGTACTTGGAAGAAGTTCTAAGAGAGGCCTACGCTCATCCTTCCATTCAAGGGGTAATCATGTTTGCTGGTCCAGCAATAGCTGGTTTCAAGGAGACGCCCCTCGCCGATGAGAATTTTCAGAATACTCCAGCTGGTGACATTGTGGACAAGCTCATTAATGAGTGGCAAACTGGGCCTAAGAAAGCCATAGTAGACAGCACAGGATTTGTAGATCTTTCACTACATCATGGAGATTATCATGTAACTGTAATACATCCTCTAAGCCAATCCTCCAAAACACTCAATCTAAGTGTGAGGAAAGATTTTTCACAACAAACCATCCATGTGAAAATGCATACCTAA 1716 0.4301 MKQGCKLLFTTTLLLLISAYCVYNSLIKQCVAETPKAQYGGGIIVNPGFDHNIEGWTVFGKGAIGERVSNEGNRFIVALNRTQPLDSFSQKVQLKKGVIYTFSAWFQVSEGSETLSVIFKTDGSELIRGGHVIAKHGCWTLLKGGIVANYSSPAEIVFESQNSTVEIWADSVSLQPFTKEQWRSHQDESIERVRKTKVRFQITHVNETALEGASVFIKQTRSDFPFGCGMNYHILTSTDYQSWFASRFKYTTFTNAMKWYSTEVKQGQENYTIPDAMLEFTKENGICVRGHNIFWDNKKMQPEWVKCLSPDELREAAAKRINSVVTRYKGELIAWDVVNENLHFRFFEDNLGENASAQYFYTAYELDQKPLLFLNEYNTIEDSGDRAACPANYIKKVEEILSYPGNEGILAAIGLQGHFSAGQPNIAYMRAGLDALDTTGLPLWLTEVSVAPDPNQAEYLEEVLREAYAHPSIQGVIMFAGPAIAGFKETPLADENFQNTPAGDIVDKLINEWQTGPKKAIVDSTGFVDLSLHHGDYHVTVIHPLSQSSKTLNLSVRKDFSQQTIHVKMHT* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0502 571 SUPERFAMILY Galactose-binding domain-like 40 176 IPR008979 -
Dod06g0502 571 Pfam Glycosyl hydrolase family 10 221 469 IPR001000 GO:0004553|GO:0005975
Dod06g0502 571 PANTHER GLYCOSYL HYDROLASE 26 568 IPR044846 GO:0004553|GO:0005975
Dod06g0502 571 SMART glyco_10 257 509 IPR001000 GO:0004553|GO:0005975
Dod06g0502 571 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 211 509 IPR001000 GO:0004553|GO:0005975
Dod06g0502 571 Gene3D Glycosidases 213 518 - -
Dod06g0502 571 SUPERFAMILY (Trans)glycosidases 211 516 IPR017853 -
Dod06g0502 571 Pfam Carbohydrate binding domain 42 158 IPR003305 GO:0016798
Dod06g0502 571 Gene3D - 32 177 - -
Dod06g0502 571 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS, PUTATIVE-RELATED 26 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0502 Dod-Chr6 6081527 6084815 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0502 17 567 Glycoside Hydrolase AT4G33820 45.907 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0502 - - gmx:100802367 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0502 06 6081527 6084815 Dod06g0502 06 6081527 6084815 ECH